Part of scaffold_207 (Scaffold)

For more information consult the page for scaffold_207 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POP5 ENSTTRG00000000153 (Bottlenosed dolphin)

Gene Details

processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000144, Bottlenosed dolphin)

Protein Percentage 69.88%
cDNA percentage 75.5%
Ka/Ks Ratio 0.56571 (Ka = 0.2603, Ks = 0.4601)

POP5 ENSBTAG00000005385 (Cow)

Gene Details

ribonuclease P/MRP protein subunit POP5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007083, Cow)

Protein Percentage 66.27%
cDNA percentage 71.69%
Ka/Ks Ratio 0.41529 (Ka = 0.287, Ks = 0.6912)

POP5  (Minke Whale)

Gene Details

processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene match (Identifier: BACU010539, Minke Whale)

Protein Percentage 71.08%
cDNA percentage 76.31%
Ka/Ks Ratio 0.54909 (Ka = 0.2473, Ks = 0.4503)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 501 bp    Location:1320498..1317415   Strand:-
>bmy_05754
ATGGTGCGGTTCAAGCACAGGTACCTGCTCTGTGAAGTGGTGTCTGACGATCCCCGCTGCCGCCTGAGTCTGGAGGACCGAGTGCTGGGCGGCCTGGTACGGGACACGATCGCCCGCGTGCACGGGACGCCTGCTCCATCGGCTTCGCGGGTGCGAGGTGCGATACCTCAATGCCTATACCGGAATAGTGCTACTTCGATGCAGGAAGGAATTCTACCGGCTTGTGTGGTCAGCTCTTCCCTTCATCACATACTTGGAGAACAAAGGACACCATTACCCGTGTTTTCTCAACACCTTACACGTACAATTAGAACATGTCAGAAGTTCCTGATTCAGTACAACAGGAGACAGCTGTTGATCCTGTTGCAGAACTGCACTGATGAAGGAGAACGAGAGGCTATCCAGAAGTCTGTCGCAAGAAGCTGTTTACTAGAGGAGGAGTCAGCTGGGGAGGAGCTTTCAGACAGTGGTGGTGAGGAGGCTGCTGAGGCAATGGAGTGA

Related Sequences

bmy_05754T0 Protein

Length: 167 aa      View alignments
>bmy_05754T0
MVRFKHRYLLCEVVSDDPRCRLSLEDRVLGGLVRDTIARVHGTPAPSASRVRGAIPQCLYRNSATSMQEGILPACVVSSSLHHILGEQRTPLPVFSQHLTRTIRTCQKFLIQYNRRQLLILLQNCTDEGEREAIQKSVARSCLLEEESAGEELSDSGGEEAAEAME*