Sequence detailsbmy_05755 (Coding sequence)

Part of scaffold_207 (SequenceType object (1))

For more information consult the page for scaffold_207 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CABP1ENSBTAG00000020049 (Cow)

Gene Details

Calcium-binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026714, Cow)

Protein Percentage 94.41%
cDNA percentage 91.99%
Ka/Ks Ratio 0.08969 (Ka = 0.0307, Ks = 0.3422)

CABP1 (Minke Whale)

Gene Details

calcium binding protein 1

External Links

Gene match (Identifier: BACU010538, Minke Whale)

Protein Percentage 92.47%
cDNA percentage 94.09%
Ka/Ks Ratio 0.27861 (Ka = 0.0418, Ks = 0.1501)

Additional orthologs identified in other species via the OPTIC pipeline.

CABP1 (Human)   Cabp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 561 bp    Location:1369643..1380420   Strand:+
Raw sequence 
>bmy_05755
ATGCGCCAGGAGGAGACCAGCTACACGGTGGTGCAGACGAGTGAGGAGGGGCTGGCGGCCAGCGGCGAGCTCCCCGGACCGCTCCTGATGCTGGCCCAGAACTGCGCCGTCATGCACAACCTGCTGGGCCCGGCCTGCATTTTCCTGCGTAAGGGCTTCGCGGAGAACAGGCAGCCTGTACAGCTCCGGGAGGCCTTCAGAGAGTTTGACAAAGACAAGGACGGCTACATCAACTGTCGGGACCTGGGCAACTGCATGCGCACCATGGGCTACATGCCCACCGAGATGGAGCTTATCGAGCTGTCTCAGCAGATCAACATGAACCATATGATTGGAGTAAAGGAACTGCGAGATGCCTTCCGAGAGTTTGACACCAATGGTGATGGGGAGATAAGTACCAGTGAGTTACGAGAGGCCATGAGGAAACTCCTGGGTCATCAGGTGGGACACCGAGACATAGAGGAAATTATCCGAGATGTGGACCTCAATGGGGATGGACGAGTGGACTTTGAAGCTCTGCCCAAAGACCCCCAGATCTACACTGTTTCAGAAATCCAGTGA

Related Sequences

bmy_05755T0 SequenceType object (3)

Length: 187 aa      View alignments
>bmy_05755T0
MRQEETSYTVVQTSEEGLAASGELPGPLLMLAQNCAVMHNLLGPACIFLRKGFAENRQPVQLREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNHMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEALPKDPQIYTVSEIQ*