Sequence detailsbmy_05760 (Coding sequence)

Part of scaffold_207 (SequenceType object (1))

For more information consult the page for scaffold_207 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HNF1AENSTTRG00000008380 (Bottlenosed dolphin)

Gene Details

HNF1 homeobox A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007940, Bottlenosed dolphin)

Protein Percentage 66.3%
cDNA percentage 66.24%
Ka/Ks Ratio 0.06046 (Ka = 0.004, Ks = 0.0659)

BT.104940ENSBTAG00000021795 (Cow)

Gene Details

hepatocyte nuclear factor 1-alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029049, Cow)

Protein Percentage 96.68%
cDNA percentage 93.35%
Ka/Ks Ratio 0.03587 (Ka = 0.0142, Ks = 0.3949)

Additional orthologs identified in other species via the OPTIC pipeline.

HNF1A (Human)   Hnf1a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1899 bp    Location:1627090..1641828   Strand:+
Raw sequence 
>bmy_05760
ATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGCGGCCTTGCTCGAGTCGGGCCTGAGCAAAGAGGCGCTGATCCAGGCGTTGGGTGAGCCGGGGCCCTACCTGCTGGCCGGAGACGGCCCCCCGGACAAGGGGGAGTCCTGCGGTGGCGGCGGTCGAGGGGAGCTGGCCGAGTTGCCCAATGGGCTGGGGGAGACGAGGGGCTCCGAGGACGAGACGGACGACGAGGGGGAGGACTTCACGCCGCCCATTCTCAGAGAGCTGGAGAACCTCAGCCCCGAGGAGGCAGCCCACCAGAAAGCCGTGGTGGAGACCCTGCTGCAGGAGGACCCATGGCGTGTGGCTAAGATGGTCAAGTCCTACCTGCAGCAGCACAACATCCCGCAGCGGGAGGTGGTCGACACCACCGGCCTCAACCAATCCCACCTGTCCCAGCACCTCAACAAGGGCACCCCCATGAAGACGCAGAAGCGAGCCGCCCTGTACACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCCCAGCAGTTCACCCACGCAGGGCAGGGTGGGCTGATTGAAGAGCCCACGGGTGATGAGCTACCAACCAAGAAGGGTCGGAGAAACCGTTTCAAATGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGCCTACGAGAGGCAGAAGAACCCCAGCAAGGAGGAGCGGGAGGCGCTGGTGGAGGAGTGTAACAGGGCGGAGTGCATCCAGAGGGGGGTGTCACCGTCACAGGCGCAGGGGCTGGGCTCCAACCTCGTCACAGAGGTGCGCGTCTACAACTGGTTTGCCAATCGGCGCAAGGAAGAAGCCTTTCGGCACAAGTTGGCCATGGACACGTACAGCGGGCCGCCACCAGGGCCAGGCCCAGGCCCTGCGCTGCCTGCCCACGGCTCCCCTGGCCTGCCCCCACCGGCCCTCTCCCCCGGTAAGGTCCACGGAGTGCGCTATGGACAGCCTGCAAGCAGTGAGGGGGCGGAAGTGCCCTCAAGCAGTGGTGGTCCCTTGGTGACAGTGTCTGCACCCCTGCATCAAGTGTCCCCCACGGGTCTGGAGCCCAGTCACAGTCTGCTGAGCACAGAAGCCAAATTGGTCTCGGCCACTGGGGGCCCGCTGCCCCCGGTCAGCACCCTGACGGCACTGCACAGCTTGGAGCAGACATCCCCGGGCCTCAGCCAGCAGCCCCAGAACCTCATCATGGCCTCGCTTCCCGGGGTCATGGCCATAGGGCCTGGTGAGCCTGCCTCCCTGGGCCCCACGTTCACCAACACGGGCGCCTCCACCCTGGTCATTGGCCTGGCCTCCACGCAGGCACAGAGCGTGCCTGTCATCAACAGCATGGGCAGCAGCCTGACTACCCTGCAGCCCGTCCAGTTCTCGCAGCCTCTGCACCCTTCCTACCAGCAGCCGCTCATGCCCTCCGTGCAGAGCCACGTGGCCCAGAGCCCCTTCATGGCCACCATGGCCCAGCTGCAGAGCCCCCATGCCCTCTACAGCCACAAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTTCCGCAGACCATGCTCATCACCGACACCACCAACCTGAGCGCCCTGGCCAGCCTCACACCCACCAAGCAGGTCTTCACCTCAGACGCTGAGGCCTCCAGTGAGTCCGGGCTTCACACACCAGCGTCCCAGGCCGCCACCATCCACATCCCCAGCCAGGACCCTGCTGGCATCCAGCACCTGCAGCCCACTCATCGGCTCAGCGCCAGCCCCACCGTGTCCTCCAGCAGCCTGGTGTTGTACCAGAGCTCCGACTCCACCAACGGCCATGGCCATCTGCTGCCGTCCAACCACAGCGTCATTGAGACCTTCATCTCCACGCAGATGGCCTCTTCCTCCCAGTAA

Related Sequences

bmy_05760T0 SequenceType object (3)

Length: 633 aa      View alignments
>bmy_05760T0
MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLAGDGPPDKGESCGGGGRGELAELPNGLGETRGSEDETDDEGEDFTPPILRELENLSPEEAAHQKAVVETLLQEDPWRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHAGQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALPAHGSPGLPPPALSPGKVHGVRYGQPASSEGAEVPSSSGGPLVTVSAPLHQVSPTGLEPSHSLLSTEAKLVSATGGPLPPVSTLTALHSLEQTSPGLSQQPQNLIMASLPGVMAIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPSVQSHVAQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDAEASSESGLHTPASQAATIHIPSQDPAGIQHLQPTHRLSASPTVSSSSLVLYQSSDSTNGHGHLLPSNHSVIETFISTQMASSSQ*