Sequence detailsbmy_05765 (Coding sequence)

Part of scaffold_212 (SequenceType object (1))

For more information consult the page for scaffold_212 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ASIC1ENSTTRG00000001008 (Bottlenosed dolphin)

Gene Details

acid-sensing (proton-gated) ion channel 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000950, Bottlenosed dolphin)

Protein Percentage 71.28%
cDNA percentage 72.77%
Ka/Ks Ratio 0.24849 (Ka = 0.0801, Ks = 0.3224)

BT.58425ENSBTAG00000000970 (Cow)

Gene Details

amiloride-sensitive cation channel 2, neuronal

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001283, Cow)

Protein Percentage 78.72%
cDNA percentage 80.92%
Ka/Ks Ratio 0.2202 (Ka = 0.1509, Ks = 0.6853)

ASIC1 (Minke Whale)

Gene Details

acid-sensing (proton-gated) ion channel 1

External Links

Gene match (Identifier: BACU008015, Minke Whale)

Protein Percentage 75.23%
cDNA percentage 80.06%
Ka/Ks Ratio 0.3056 (Ka = 0.1803, Ks = 0.5899)

Additional orthologs identified in other species via the OPTIC pipeline.

ASIC1 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1827 bp    Location:67082..59816   Strand:-
Raw sequence 
>bmy_05765
GGCTCCGGCCCCGCTCCTCTCCATCGGACTCCCTTTCCCACAGCCATCAATTATTCATCGGCTCAGACAGCCGCCTCCCTGACAGGGCAGGATGGTCCTCCTCTCCTCTCTAAGCCCCTCCCCACCTCAGCCACACTGCCACAGAGGCCCTGGCAAGGGAGGACGGCCAGCCAGGCAGCAGAGACCTGGCAAGAGGACTGCTGGACCCTGCCTAGGATCACATCTCCTCCCCTGTTCTCCTGCCCACCTCCTGGTGCCAGGAAGCCCCTGGAGAAGATGCCCATCCAGATCTTCTGCTCTGTGTCATTCTCCTCTGGAGAGGAGGCCCCAGGGCCCTTGGGAGATATTTGGGGTCCCCACCAGCGGCAACAGCGGGACAACTCAGAATCAGAAGAGGAGGGAGAAGAGAAGGAAAAGGAGGCAGAGAGGAAGGGGGCCAGAGAGAGGGACTTACCGATGGACTTGGTGGCCTTTGCCAACAGCTGCACCCTTCATGGAGCCAGCCACATCTTTGTGGAAGGGGGTCCAGGGCCACGGCAGGCCCTGTGGGCAGCGGCCTTTATCCTGGCACTGGGTGCCTTCTTGTGCCAGGTCGGGGATCGAGTTGCCTATTACCTCAGCTACCCACATGTGACTCTGCTAGATGAAGTGGCCACGACGGAGCTGGCCTTCCCGGCGGTCACCCTCTGCAACACCAATGCCGTGCGGCTCTCCCAGCTCAGCTACCCCGACTTGCTCTACCTGGCCCCCATGCTGGGGCTGGATGAAAGCGATGACCCCGGGGTGCCCCTCGCCCCACCGGGGCCCGAGGCCTTCTCTGGGGAGCCCTTTAACCTGCACCGCTTCTACAATCGCTCCTGCCACCGGCTGGAGGACATGCTGCTCTATTGCTCCTACTGCGGGGGGCCCTGTGGCCCTCACAACTTCTCAGTGGTCTTCACACGGTATGGAAAGTGCTACACGTTCAACTCTGGCCGAGATGGGCGTCCCAGGCTGAAGACCATGAAGGGTGGGACGGGCAATGGGCTGGAGATCATGCTGGACATTCAGCAGGACGAGTACCTGCCCGTGTGGGGGGAGACCGATGAGACGTCCTTCGAAGCGGGCATCAAAGTGCAGATCCACAGTCAGGATGAACCTCCCTTCATCGACCAGCTGGGCTTTGGTGTAGCCCCAGGGTTCCAGACCTTTGTGGCCTGTCAAGAGCAGCGGCAGCTCATCTACCTGCCCCCGCCCTGGGGCACCTGCAAAGCTGTTACCATGGACTTGGATTTCTTCGACTCCTACAGCATTACCGCCTGCCGCATCGACTGTGAGACCCGCTACCTGGTGGAGAACTGTAACTGCCGCATGGTGCACATGCCAGGGGATGCCCCATACTGCACTCCAGAGCAGTACAAGGAGTGTGCAGATCCTGCCCTGGACTTCCTGGTGGAGAAGGACCAGGAGTACTGTGTGTGTGAAATGCCCTGCAACTTGACTCGCTATGGCAAGGAGCTGTCCATGGTCAAGATCCCCAGCAAAGCATCAGCCAAGTACCTGGCCAAGAAGTTCAACAAATCTGAGCAGTACATAGGCATCCTCACTGTGCTGGAGCTCTTCGACTACGCCTACGAGGTGATAAAACACAAGCTGTGCAGACGAGGGAAGTGCCAGAAGGAGGTCAAACGGAGCAGCGCGGACAAGGGCGTGGCCCTCAGCCTGGATGACGTCAAAAGACACAACCCGTGTGAGAGCCTCCGGGGCCATCCTGCCGGGATGACGTATGCTGCCAACATCCTACCTCACCATCCGGCCCGAGGCACTTTTGAGGACTTTACCTGCTGA

Related Sequences

bmy_05765T0 SequenceType object (3)

Length: 609 aa      View alignments
>bmy_05765T0
GSGPAPLHRTPFPTAINYSSAQTAASLTGQDGPPLLSKPLPTSATLPQRPWQGRTASQAAETWQEDCWTLPRITSPPLFSCPPPGARKPLEKMPIQIFCSVSFSSGEEAPGPLGDIWGPHQRQQRDNSESEEEGEEKEKEAERKGARERDLPMDLVAFANSCTLHGASHIFVEGGPGPRQALWAAAFILALGAFLCQVGDRVAYYLSYPHVTLLDEVATTELAFPAVTLCNTNAVRLSQLSYPDLLYLAPMLGLDESDDPGVPLAPPGPEAFSGEPFNLHRFYNRSCHRLEDMLLYCSYCGGPCGPHNFSVVFTRYGKCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRQLIYLPPPWGTCKAVTMDLDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGILTVLELFDYAYEVIKHKLCRRGKCQKEVKRSSADKGVALSLDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC*