Sequence details bmy_05774 (Coding sequence)

Part of scaffold_212 (Scaffold)

For more information consult the page for scaffold_212 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRPF40B ENSTTRG00000011801 (Bottlenosed dolphin)

Gene Details

PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011192, Bottlenosed dolphin)

Protein Percentage 99.54%
cDNA percentage 99.12%
Ka/Ks Ratio 0.12979 (Ka = 0.0032, Ks = 0.0246)

PRPF40B ENSBTAG00000016589 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022067, Cow)

Protein Percentage 97.7%
cDNA percentage 95.79%
Ka/Ks Ratio 0.07776 (Ka = 0.0115, Ks = 0.1483)

Additional orthologs identified in other species via the OPTIC pipeline.

PRPF40B (Human)   Prpf40b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2931 bp    Location:440744..426139   Strand:-
Raw sequence 
>bmy_05774
ATGATGCCACCACCCTTCATGCCTCCTCCAGGAATCCCCCCACCTTTTCCTCCAATGGGGCTCCCCCCGATGAGTCAGAGACCACCGGCCATCCCCCCCATGCCACCTGGCATCATGCCCCCAATGCTTCCACCAATAGGGGCGCCACCACCACTCACACAGATACCAGGAATGGTACCACCCATGATGCCAGGAATGCTGATGCCAGCGGTGCCCGTCACCGCAGCGACGGCTCCAGGTGCGGACACCGCCAGCTCTGCTGTGGCTGGGACGGGCCCTCCGAGGGCCCTGTGGAGTGAGCATGTGGCCCCTGATGGGCGCATCTACTACTACAATGCTGACGACAAGCAGTCCGTGTGGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGCTCCTGCTATCCCAGTGTCCCTGGAAAGAGTACAAGTCGGACACAGGCAAACCTTACTACTATAACAACCAGAGTAAGGAGTCCCGCTGGACCCGGCCCAAGGACCTGGATGACCTGGAGGCTCTAGTCAAACAAGAGGCTGCAGGGAAACGGCAGCAGCCACGGACACTACAGCCTCAGCCTCCTCAGCCACAGCCTGACCCCCCACCTGTGCCGCCTGGCCCCACCTTGGTGCCCACGGGCCTCCTAGAACCTGAGCCAGGTGGGAGTGAAGATTGCGATGTGTCAGAGGCTGCCCAGCCCCTGGAGCAGGGGTTCCTGCAGCAGCCGGAGGAGGGCCCCAGCAGTTCTGCTGGACAGCATCAGCCACCACAGCAGGAGGAAGAGGAATCGAAGCCAGAACCGGAGAGGTCTGGCCTCAGTTGGAGCAATCGGGAGAAGGCAAAGCAGGCCTTCAAGGAGCTGCTGAGGGATAAGGCTGTCCCCTCCAATGCTTCGTGGGAACAGGCCATGAAGATGGTGGTCACCGACCCCCGTTACAGTGCCTTGCCCAAACTGAGTGAGAAAAAGCAGGCATTCAATGCCTACAAGGCGCAGCGGGAGAAGGAGGAGAAGGAAGAGGCCCGGCTAAAAGCCAAGGAGGCCAAGCAGACCTTGCAGCATTTCTTGGAGCAGCATGAGCGCATGACCTCCACCACCCGCTACCGGTCAGGGGGCCGGGCTGGGGTGGGGCCTGGGAACCCTGAGAACCCGCGGGCCCAGTCTCTGTTCTCTGCCTGCCTACTCACAGCCCATATGCTCCACAGGCGGGCAGAACAGACCTTTGGGGAGCTGGAGGTCTGGGCTGTGGTCCCCGAGAGGGATCGAAAAGAGGTTTATGATGATGTCCTTTTCTTCCTGGCCAAGAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCGCAACATCCAGGCCCTGAAGAGCATCCTGGATGGGATGAGTAGCGTCAACTTCCAAACCACATGGTCCCAGGCCCAGCAGTACCTCATGGATAACCCCAGCTTTGCTCAGGACCATCAGCTGCAGAACATGGACAAGGAAGATGCGCTGATCTGCTTTGAGGAGCACATCCGTGCTTTGGAGAGGGAGGAGGAGGAGGAGCGGGAGAGGGCCCGGCTTCGGGAGCGGCGCCAGCAGCGCAAGAACCGGGAGGCCTTTCAGACCTTCCTGGATGAGCTGCACGAGACAGGGCAGCTGCACTCTATGTCCACCTGGATGGAGCTGTACCCAGCGGTCAGCACTGATGTCCGCTTTGCCAACATGCTGGGTCAGCCGGGCTCCACCCCTCTGGACTTATTCAAGTTCTATGTGGAGGAGTTGAAGGCACGATTCCATGATGAGAAGAAGATCATTAAGGACATCCTTAAGGACCGGGGCTTCTGCGTGGAGGTGAACACAGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCTGCGCTGGATGCAGGCAACATCAAGCTGACTTTCAATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAGAGAGCGGGAGAAGGAGGAGGCACGAAGGCTGCGGCGCAGAGAAGCTGCCTTTCGAAGCATGCTGAGGCAGGCTGTGCCTGCTGTGGAGCTGGGCACTGCCTGGGAAGAGGTCCGTGAGCGCTTTGTGTGCGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCGGGAGTTCCTGCAGGTACTGGAGACTGAATGCCAGCACCTCCACAGCAAAGGCCGGAAACACGGCAGAAAGGGCAAGAAGCACCATCACAAGCGTTCCCACTCGCCCTCAGTGAGTTGGCGGGTAGAAAGGATGTGGGGTGAGGCTGGATTGTCTGGGGGAAATAAGAGCCACTTTTCTTGCTTTTCCCCTACATCACCTCCCCTGGAGGAAGATTTGAGGATTCCTTTGGCCCTGGATTCTCCTCTCTGTCCCCAGTTCCCATACTTGAGGGCCTCTGGAGCCCAGGTAACCTCTGTGCTGACACGTATCTGCCGATCTCCCCAGGGCTCTGAGTCAGAAGATGAGGAGCTGCCCCCACCATCTCTCCGGCCCCCCAGGCGGAGGCGGCGGAACCCCTCGGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCTGTTGAAAGTGGGGGTGCTGCCCTTGGGGGACGGGGTTCCCCATCCTCCCGCCTTCTCCTTGGATCAGATCATGGCCTTCGGAAAGTCAAGAAACCAAAAAAGAGAACTAAGAAGAGAAGACACAAGTCGAACAGTCCTGAGAGCGAGACAGACCCTGAGGAGAAAGCGGGCAAGGAGAGTGATGAGAAAGAACCAGAGCAGGACAAGGACAGGGACCTCCGGCGGGCAGAGCTCCCTAACCGCTCCGCAGGCTTTGGAATCAAGAAGGAGAAGACGGGCTGGGACACGTCGGAAAGCGAGCTGAGCGAGGGTGAGCTGGAAAGACGGCGGCGGACGCTCCTGCAGCAGCTGGATGACCACCAGTGA

Related Sequences

bmy_05774T0 Protein

Length: 977 aa      View alignments
>bmy_05774T0
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPIGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKRQQPRTLQPQPPQPQPDPPPVPPGPTLVPTGLLEPEPGGSEDCDVSEAAQPLEQGFLQQPEEGPSSSAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLKAKEAKQTLQHFLEQHERMTSTTRYRSGGRAGVGPGNPENPRAQSLFSACLLTAHMLHRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRLRRREAAFRSMLRQAVPAVELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHSKGRKHGRKGKKHHHKRSHSPSVSWRVERMWGEAGLSGGNKSHFSCFSPTSPPLEEDLRIPLALDSPLCPQFPYLRASGAQVTSVLTRICRSPQGSESEDEELPPPSLRPPRRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKVKKPKKRTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRDLRRAELPNRSAGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ*