Part of scaffold_212 (Scaffold)

For more information consult the page for scaffold_212 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCNT1 ENSTTRG00000002565 (Bottlenosed dolphin)

Gene Details

cyclin T1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002407, Bottlenosed dolphin)

Protein Percentage 44.17%
cDNA percentage 44.28%
Ka/Ks Ratio 0.34798 (Ka = 0.0213, Ks = 0.0612)

CCNT1 ENSBTAG00000005861 (Cow)

Gene Details

Cyclin-T1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007703, Cow)

Protein Percentage 91.04%
cDNA percentage 94.15%
Ka/Ks Ratio 0.53102 (Ka = 0.05, Ks = 0.0941)

CCNT1  (Minke Whale)

Gene Details

cyclin T1

External Links

Gene match (Identifier: BACU007981, Minke Whale)

Protein Percentage 97.31%
cDNA percentage 98.21%
Ka/Ks Ratio 0.63802 (Ka = 0.016, Ks = 0.025)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location:1204338..1215833   Strand:+
>bmy_05806
ATGACACTCTCTTGTTTCCTTCCCTCTGATGTCAGCCTGCATTTGACCACATTTAGCCTGCAGTACACACCTCCTGTGGTGGCCTGTGTCTGCATTCATCTGGCTTGCAAGTGGTCCAACTGGGAGATCCCAGTCTCAACTGATGGGAAGCACTGGTGGGAGTATGTTGACGCCACTGTGACCTTGGAACTTTTAGATGAACTGACACATGAATTTCTACAGATTCTGGAGAGAACCCCCAACAGGCTCAAACGAATTCGGAATTGGAGGGCATGCCAGGCTGCCAAGAAAACAAAAGCAGATGACCGAGGAGCAGATGAAAACACTTCGGAGCAGACAATCCTTAATATGATTTCCCAGAGCTCTTCAGATACAACTATTGCAGGTTTAATGAGTATGTCAGCTTCTTCTACCACAAGTGCAGTGCCTTCCCTTCCAGCCACTGAAGAGTCAACCAGTAACTTAAGCAATGTGGAGATGTTGCCCAGTGAGCGTTGGCTGTCCTCCCACCCTCCTTTTAAGGTAGAACCTGCTCAGGGTCATCGGACTAGTGAGAATTTAGCACTTATAGGAGTTGATCATTCCTTGCAACAGGATGGTTCAAATGCATTTGTTTCCCAGAAGCAGAATAGTAAGAGTGTGCCATCAGCTAAAGTATCACTGAAAGAATACCGTGCAAAGCATGCAGAAGAGTTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAGGCCAATGTGAAGTCACAGTATGCCTATGCTGCCCAGAATCTCCTGTCTCACCATGATAGCCATTCTTCCGTCCTTCTGAAAATGCCCATAGAGGGCTCAGAAAACCCTGAGCGGTCTTTTCTGGAAAAGACTGACAAAACAGCTCTCAAAATGAGAATCCCAGTGACAAGTGGAGATAAAGCTGCCACTGCAAAACCAGAGGAGATAAAAATGCGCATTAAAGTTCACACTGCAGCTGACAAGCACAATTCTGTAGATGACAGTGTCACAAAGAGCCGCGAGCACAAAGAAAAGCACAAGACTTACCCATCTAATCATCATCATCATCATAATCACCACTCACACAAACACTCTCACTCACAGCTTCCAGCTAGTACTGGGAACAAACGTCCAGGTGATCCAAAACATAGTAGCCAGACAAGCACCTTAGCACACAAACCCTATAGCTTGTCTAGCTCTTTCTCCTCTTCCAGTTCTTCTCGTAAAAGGCCCCTCCCTGAAGAGACTGGAGGGGCAGTGTTTGATCATTCAGCCAAGACTGCCAAGAATACTAAATCCTCTTCCATAAATTTCTCCTTCCCTCCTCTTCCTACAATGGCCCAGTTGCCTGGACATAGCTCAGACACAAGTGGCCTTACTTTTTCACAGCCCAGCTGTAAAACTCGAGTTCCTCACATGAAATTGGATAAAGGCTCCACTGGGGCCAACGGTCACAATGCAACCCAGACCATAGACTATCAAGATACTGTGAATATGCTTCACTCCCTTCTCAATGCCCAAGGTGTTCAGCCTACTCAGCCGCCTGCGTTTGAATATGTTCATTCTTACGGAGAGTATCTGAATCCACGGGCTGGTGGAATGTCCTCCAGACCTGGCAATACAGACAAACCCCGGCTACCACCTCTACCATCAGAACCTCCTCCACCACTTCCACCCCTTCCCAAGTAA

Related Sequences

bmy_05806T0 Protein

Length: 559 aa      View alignments
>bmy_05806T0
MTLSCFLPSDVSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILERTPNRLKRIRNWRACQAAKKTKADDRGADENTSEQTILNMISQSSSDTTIAGLMSMSASSTTSAVPSLPATEESTSNLSNVEMLPSERWLSSHPPFKVEPAQGHRTSENLALIGVDHSLQQDGSNAFVSQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAYAAQNLLSHHDSHSSVLLKMPIEGSENPERSFLEKTDKTALKMRIPVTSGDKAATAKPEEIKMRIKVHTAADKHNSVDDSVTKSREHKEKHKTYPSNHHHHHNHHSHKHSHSQLPASTGNKRPGDPKHSSQTSTLAHKPYSLSSSFSSSSSSRKRPLPEETGGAVFDHSAKTAKNTKSSSINFSFPPLPTMAQLPGHSSDTSGLTFSQPSCKTRVPHMKLDKGSTGANGHNATQTIDYQDTVNMLHSLLNAQGVQPTQPPAFEYVHSYGEYLNPRAGGMSSRPGNTDKPRLPPLPSEPPPPLPPLPK*