Sequence detailsbmy_05820 (Coding sequence)

Part of scaffold_215 (SequenceType object (1))

For more information consult the page for scaffold_215 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM8ENSBTAG00000020570 (Cow)

Gene Details

PR domain zinc finger protein 8

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000046130, Cow)

Protein Percentage 73.27%
cDNA percentage 78.11%
Ka/Ks Ratio 0.38746 (Ka = 0.2025, Ks = 0.5227)

Additional orthologs identified in other species via the OPTIC pipeline.

PRDM8 (Human)   Prdm8 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1386 bp    Location:191747..185734   Strand:-
Raw sequence 
>bmy_05820
ATGGAGGATTCGGGCATCCAGAGAGGCATCTGGGATGGAGATGCCAAAGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACCTGCGACATCCCTGAGAATGCTATATTCGGTCCCTGCATCCTGAGCCATACTTCCCTGTACGACAGCATAGCTTTCATAGCTCTCAAGTCCACCGACAAGAGAACGGTCCCTTATATCTTCCGGGTAGACACCTCAGCGGCGAATGGTTCCTCAGAAGGTCTGATGTGGCTGCGTTTGGTCCAATCAGCCAGAGATAAAGAAGAGCAGAACCTTGAAGCCTACATAAAAAACGGACAGCTGTTTTACCGCTCTCTCCGCAGGATTGCCAAAGATGAGGAGTTACTTGTTTGGTACGGGAAAGAACTGACTGAGTTACTCTTGCTCTGCCCCTCTAGATCCCACAGCAAAATGAATGGTAGCGTTGATGTGAGCCCCCGAGAGGAGCAAGGCAGCGGCGTGGGCACCAAGGATCACGGGGGCGGCGGCGGCGGCAAGGACCAGCAGCCGCCGCAGCCACAGGAGACACCCTTGGGTCCCAGCCCCAAGTTCTGCAAAGCCGGCCCGGTCCACCATTACCCGGCCCCCTCCCCCGAGGGCGGTAACCCGCCTGCGGCTGGCGGCGGCGGCAGCAGCGCGAAGCCGTCCACGGACTTTCACAACCTGGCGCGGGAGCTGGAGAACTCCGGGGGAGCCAGCAGCTGCTCCCCAGTGCGGAGCCTCAGCGGCGGCAGCGACCACCAGGAGGCGGAGCTGAGTCCCGACGGCAATGCCGCGGGCCCGGCGCGCTCCTTCTCTCAGCTGTCCCCGCTGGTGCTGGGCCAGAAGCTGAGCGCGCTCGAGCCCTGCCACCCCGGAGACGGTGTGGGCCCCACCAGACTGTACCCCGCCGCCTCCGATCCTCTGGCCGTGAAGCTCCAAGGAGCTGCGGACCTGAACGGAGGTTGCGGGTCCCTGCCGAGCGGCGGTGGCGGCGGCGGCGGCGGCGGGCTGCCCAAACAGAGCCCCTTCCTCTACGCCACCGCCTTCTGGCCCAAGAGCTCCGCCGCCGCGGCGGCCGCGGCGGCTGCGGCCGCGGGGCCCCTGCAGTTGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCTCCTTCACCTCTCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCATGACCTCCGACCTGGTGTACCACATGAGGTCGCATCACAAAAAGGAGTACGCCATGGAGCCCTTGGTGAAGCGAAGACGGGAGGAGAAACTCAAGTGCCCCATTTGCAACGAGTCCTTCAGGGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATTGA

Related Sequences

bmy_05820T0 SequenceType object (3)

Length: 462 aa      View alignments
>bmy_05820T0
MEDSGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCILSHTSLYDSIAFIALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRIAKDEELLVWYGKELTELLLLCPSRSHSKMNGSVDVSPREEQGSGVGTKDHGGGGGGKDQQPPQPQETPLGPSPKFCKAGPVHHYPAPSPEGGNPPAAGGGGSSAKPSTDFHNLARELENSGGASSCSPVRSLSGGSDHQEAELSPDGNAAGPARSFSQLSPLVLGQKLSALEPCHPGDGVGPTRLYPAASDPLAVKLQGAADLNGGCGSLPSGGGGGGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN*