Part of scaffold_211 (Scaffold)

For more information consult the page for scaffold_211 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PNPLA1 ENSTTRG00000010733 (Bottlenosed dolphin)

Gene Details

patatin-like phospholipase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010176, Bottlenosed dolphin)

Protein Percentage 83.55%
cDNA percentage 87.37%
Ka/Ks Ratio 0.72855 (Ka = 0.1278, Ks = 0.1753)

PNPLA1 ENSBTAG00000015118 (Cow)

Gene Details

patatin-like phospholipase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020115, Cow)

Protein Percentage 75.25%
cDNA percentage 81.58%
Ka/Ks Ratio 0.59724 (Ka = 0.1841, Ks = 0.3082)

PNPLA1  (Minke Whale)

Gene Details

patatin-like phospholipase domain containing 1

External Links

Gene match (Identifier: BACU018042, Minke Whale)

Protein Percentage 73.07%
cDNA percentage 78.92%
Ka/Ks Ratio 0.60669 (Ka = 0.2221, Ks = 0.3661)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location:288916..311515   Strand:+
>bmy_05851
ATGGCCCTGGGAACTTTTGCTTCCGAAGTCAGAGTTGTTTTGCTTTTGGCTAAAGCCAATAATGCATTCAGAACAGAGAAGGAAAATGGACTCGGAGAATTGCATGGCTTTCCTGGGAACGCGACTCCGCTCGCCAACGCCTCCACAGAGGCTGCTGAGCCCCCTGATTCCCCGGTGCCCACCGCTCCCGCAGGTGGGGGAGCAGGGCCGCAGCGAGAGGGGCCTCACGATGAGTACCTCCGAGTCCTCAATGTGGGTGTGGCCGAGGTGAAGAAATCCTTCTTGGGGCCCTTGTCCCCGTCCTGTAAGCTGGTGCAGATGATGAGGCAGTTTCTGTACCGGGTCCTGCCTGAGGACTCCTACAAGGTCGCCACGGGGAAGCTCCACGTGAGCCTCACCCGGTTCACGGATGGAGAGAGTGTTGTGGCCCTGTACTGCAGCTGCTTTGTCCCTGTGTACTGCGGCCTCATTCCTCCAACTTACCGTGGCGTGCGGTACATCGACGGGGGCTTCTCGGGCATGCAGCCCTGCTCCTTCTGGACGGACTCCATCACCATCTCCACCTTCAGTGGTCAGCAGGACATCTGCCCGCGGGACTGCCCCGCCATCTTCTGTGACTTCCGCATGTTCAACTGCTCTTTCCAGTTCTCCCTGGAGAACATCGCCAGGATGACCCATGCCCTGTTCCCCCCAGACCTGGTGATCCTGCACAATTATTACTACCGAGGGTATGAAGATGCCGTTTCGTACTTGCGGCGGCTGAATGCTGCTTACCTTAATTCTCCTTCCAAGAGAGTGATTTTCCCCTGGGTAGAAGTGTACTGCCAGATAGAACGTGCCCTTGGCAATGAGTGCCCTGAAAACTGTCAACCAAGCCTCCAAACAGAGTGGGCCAGTCCAGAAGAATCCAGACAACTTCACACACAATGGGCTCCCAAAGGGGAAAGAAAAGGTGGCCGTGGTCCACCTCTGTCCCCACCTGTGCAGACACCTGAATCCACATGTGAGTGGCCTGTGGAGTCACCTGTTTCACCACCTGCATCGCCACTGGCCTCATCACCATCACATCCTCCAACTGACTTGCCACCTGTATCACTCCCAGCTGTGCACTTCCTCCCCAGCTCAACACCTGGGCTGTCACCTGTATCACCATCACAGCAGGTACAACTGACCGGATCACCACCCAGATCCCCACCCCCCCAGTCATCTATGTCATCCAGGACGTCCCTGGGGCCTTCCACTGTGGGGACATCTCCAACATTGCCCCAGTGTTCCTCTTCAGCATCACCTGCACAGCCACCTGTGGAGGAACTGGGCCCAGAACAGCCCCAAGCTCCCTTTGCTTCTTCAAATTCCAAAAGCACCGTGCCTCTGGCTAATGTGAAGGAAACCATGAGCAAGCCTTATGCAATGGAGAGAACTGCTGAAGACTCCAGTTGGGTGAGCAAGGTATTCAAGAAGAACAAACAAAAGACAAGTGACACCAGAAAAGGCTTCCCAAGACATCCACAATCTAAAACACCAGGCAGCAAAATGCAGTGA

Related Sequences

bmy_05851T0 Protein

Length: 514 aa      View alignments
>bmy_05851T0
MALGTFASEVRVVLLLAKANNAFRTEKENGLGELHGFPGNATPLANASTEAAEPPDSPVPTAPAGGGAGPQREGPHDEYLRVLNVGVAEVKKSFLGPLSPSCKLVQMMRQFLYRVLPEDSYKVATGKLHVSLTRFTDGESVVALYCSCFVPVYCGLIPPTYRGVRYIDGGFSGMQPCSFWTDSITISTFSGQQDICPRDCPAIFCDFRMFNCSFQFSLENIARMTHALFPPDLVILHNYYYRGYEDAVSYLRRLNAAYLNSPSKRVIFPWVEVYCQIERALGNECPENCQPSLQTEWASPEESRQLHTQWAPKGERKGGRGPPLSPPVQTPESTCEWPVESPVSPPASPLASSPSHPPTDLPPVSLPAVHFLPSSTPGLSPVSPSQQVQLTGSPPRSPPPQSSMSSRTSLGPSTVGTSPTLPQCSSSASPAQPPVEELGPEQPQAPFASSNSKSTVPLANVKETMSKPYAMERTAEDSSWVSKVFKKNKQKTSDTRKGFPRHPQSKTPGSKMQ*