Sequence detailsbmy_05872 (Coding sequence)

Part of scaffold_211 (SequenceType object (1))

For more information consult the page for scaffold_211 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF8ENSTTRG00000004028 (Bottlenosed dolphin)

Gene Details

ring finger protein 8, E3 ubiquitin protein ligase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003788, Bottlenosed dolphin)

Protein Percentage 88.48%
cDNA percentage 89.3%
Ka/Ks Ratio 0.28906 (Ka = 0.0135, Ks = 0.0465)

RNF8ENSBTAG00000008321 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF8

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010959, Cow)

Protein Percentage 90.69%
cDNA percentage 94.04%
Ka/Ks Ratio 0.41336 (Ka = 0.0463, Ks = 0.1119)

RNF8 (Minke Whale)

Gene Details

ring finger protein 8, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU018020, Minke Whale)

Protein Percentage 98.03%
cDNA percentage 98.77%
Ka/Ks Ratio 0.27963 (Ka = 0.0083, Ks = 0.0296)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF8 (Human)   Rnf8 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1227 bp    Location:1233355..1252784   Strand:+
Raw sequence 
>bmy_05872
CAGAGTCTGAATGGTGTTTGGCTGAACAGAGAACGTCTAGAGCCTTTAAAGGTCTATTCTATCCATAATGGAGATCACATCCAGCTTGGGGTGCCTCTGGAAAATAAGGAGAATGCAGAGTATGAATATGAAGTTACTGAAGAAGACTGGGAGAGGATTTACCCTTGTCTTTCCCCAAAAAGTGACCAGATGATGGAAAAAAATAAGGGCTTGAGAACTAAAAGGAAATTTAGTTTGAATGAATTAGAGGGTTCTGGAGCTGAAGGCCCCTCAAATTTGAAATCCAAAATAAGTAAAGTGTCTTGTGAGTCTGGTCAGCCAGTGAAGTCACATGGGAAGGGTGAAGTGGCTAGTCAACCCTCTGAATATTTGGATCCTACTTTGACTTCTCTTCAGCTAAGTGGGAAGACCACAGGGGCTCATGTTTACCCAGGCCCCGCAAAAGTTGTAGAGCTTCATTATAAGAAGCAGAAAGCCTCAAATCCTTCAGCATCTCAGAGCAGCTTAGAGCTGTTTAAGGTAACGATGTCCAGGATTCTAAAGCTGAAAACACAGATGCAGGAAAAGCAGGTAGCTGTTCTGAATGTGAAAAAGCAGACCCAAAAAGGGAACTCGAAGAAAATTGTGAAAATGGAGCAGGAACTGCAGGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAACAGCAGGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCATCTCCAGGGTTTGGAGAAGGAGCAAGGGGAAGAGGACCTGAAGCAACAGCTGGCCCAGGCTCTGCAGGAGCATCGGGCTCTGATGGAACAGCTAAATCGCAGCAAGAAGGACTTTGAAGCAATCATTCAAGCCAAGAACAAAGAATTGGAGCAGACCAAGGAAGAGAAGGAGAAGGTGCAAGCACAGAAGGAGGAAGTTCTAAGCCATGTGAATGACGTGCTAGAGAATGAGCTCCAGTGTATTATTTGTTCAGAATACTTCATTGAGGCTGTCACCTTGAACTGTGCCCATAGTTTCTGCTCCTACTGTATCAGTGAGTGGATGAAGCGGAAGATAGAATGCCCCATTTGTCGGAAGGACATCAAGTCGAAAACCCACTCCCTGGTTCTAGACAATTGCATTAATAAGATGGTAGATAATCTGAGCTCGGAAGTGAAAGAACGACGAATTGTCCTCATCAGGGAACGAAAAGCAAAGAGACTGTCCTGA

Related Sequences

bmy_05872T0 SequenceType object (3)

Length: 409 aa      View alignments
>bmy_05872T0
QSLNGVWLNRERLEPLKVYSIHNGDHIQLGVPLENKENAEYEYEVTEEDWERIYPCLSPKSDQMMEKNKGLRTKRKFSLNELEGSGAEGPSNLKSKISKVSCESGQPVKSHGKGEVASQPSEYLDPTLTSLQLSGKTTGAHVYPGPAKVVELHYKKQKASNPSASQSSLELFKVTMSRILKLKTQMQEKQVAVLNVKKQTQKGNSKKIVKMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEQQHLQGLEKEQGEEDLKQQLAQALQEHRALMEQLNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCISEWMKRKIECPICRKDIKSKTHSLVLDNCINKMVDNLSSEVKERRIVLIRERKAKRLS*