Part of scaffold_211 (Scaffold)

For more information consult the page for scaffold_211 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MDGA1 ENSTTRG00000001104 (Bottlenosed dolphin)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001037, Bottlenosed dolphin)

Protein Percentage 86.36%
cDNA percentage 87.2%
Ka/Ks Ratio 0.2876 (Ka = 0.0255, Ks = 0.0888)

MDGA1 ENSBTAG00000005888 (Cow)

Gene Details

MAM domain-containing glycosylphosphatidylinositol anchor protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044710, Cow)

Protein Percentage 95.6%
cDNA percentage 93.47%
Ka/Ks Ratio 0.07807 (Ka = 0.0238, Ks = 0.3044)

MDGA1  (Minke Whale)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene match (Identifier: BACU018017, Minke Whale)

Protein Percentage 98.92%
cDNA percentage 99.24%
Ka/Ks Ratio 0.19515 (Ka = 0.0045, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2865 bp    Location:1516638..1492153   Strand:-
>bmy_05877
GAGGGAGCCTTAGACGCCCTCTGGCCTCGGTGCCTCCTGTCTAAACCTCCCCGTCTCCCACCAGCTCCAGCCCAGGCTCAGATTGTGCACGCGGGCCAGGCGTGTGTGGTGAAAGAGGACAACATCAGTGAGCGCGTCTACACCATCCGGGAGGGGGACACCTTGGTGCTGCAGTGCCTGGTCACCGGGCACCCTCGGCCCCAGGTGCGTTGGACCAAGACCGCGGGCAGCGCGTCAGACAAGTTCCAGGAGACGTCGGTGTTCAATGAGACACTGCGCATCGAGCGCATCGCGCGCACGCAGGGCGGCCGCTACTACTGCAAGGCCGAGAACGGCGTGGGCGTGCCTGCCATCAAGTCCATCCGGGTGGACGTGCAGTACCTGGACGAGCCAGTGCTGACAGTACACCAGACAGTGAGTGATGTTCGAGGCAACTTCTACCAGGAGAAGACGGTGTTCCTGCGCTGTACGGTCAACTCCAACCCACCTGCCCGCTTCATCTGGAAGCGGGGCTCGGACACCTTGTCTCACAGCCAGGACAATGGGGTCGACATCTATGAGCCCCTCTACACCCAGGGGGAGACCAAGGTCCTGAAGCTGAAGAACCTGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGGTGTCTGTACGCAACGTGTGTGGCATCCCGGACAAGGCCGTCACCTTCCGGCTCACCAACACCACGGCACCACCAGCCCTGAAGCTGTCTGTGAACGAAACTCTGGTGGTGAACCCTGGGGAGAATGTGACGGTACAGTGTCTGCTGACAGGCGGTGATCCCCTGCCCCAGCTGCAGTGGTCCCATGGACCAGGCCCGCTGCCCCTGGGTGCCCTGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGCAGGCCCGAGACTCTGGCTACTACAACTGCACAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCTCCTGGTGCGATCCATGAAGAATGCCACATTCCAGATCACCCCAGATGTGATCAAAGAGAGCGAGAACATACAGCTGGGCCAGGACCTGAAGCTGTCATGCCATGTGGATGCAGTGCCCCAGGAGAAGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCAGCGCGCATGTCCAAGAGGCTGCTGGTGACTCGCAATGACCCTGAGTTGCCCGCTGTCACCAGCAGCCTAGAGCTCATTGACCTACACTTCAGCGACTACGGCACCTATCTGTGTGTGGCTTCCTTCCCGGGGGCACCTGTGCCCGACCTGAGCGTCGAGGTCAACATCTCCTCTGAGACAGTGCCTCCCACCATCAGCGTGCCCAAGGGCAGGGCCGTGGTGACCGTGCGCGAGGGCTCGCCCGCCGAGCTGCAGTGCGAGGTGCGGGGCAAGCCGCGGCCGCCTGTGCTTTGGTCCCGTGTGGACAAGGACGCTGCGTTGCTGCCCTCGGGGCTGACCCTCGAGGAGACCTCGGACGGGAAGCTGCGGCTGGAGCGCGTGAGCCGCGACATGAGTGGGACCTACCGCTGCCAGACGGCTCGCTATAATGGCTTCAACGTGCGCCCCCGCGAGGCCCAGGTGCAGCTGAACGTGCAGTTCCCGCCGGAGGTGGAGCCCAGCTCCCAGGACGTGCGCCAGGCACTGGGCCGGCCAGTGCTGCTGCGCTGCTCGCTGCTTCGAGGCAGCCCCCAGCGCATCTCCTCGGCTGTGTGGCGCTTCAAAGGGCAACTGCTGCCTCCGCCGCCTGCTGTCCCCGTCGCCGCCGAGGCCCCCGACCACTCCGAGCTGCGCCTCGACGCCGTCACCCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGACGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCTCGGCCAAAGCCTACAGCCCGGAGTTTTACTTCGACACCCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAATTACTCCTACGTGCTGCAGTGGACCCAGAGGGAGCCGGACGCTGTCGACCCTGTGCTCAACTACAGACTCAGTGTCCGCCAGTTGAATCAGCAAAACGCCATGGTGAAGGCCATCCCGGTGCGGCATGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGACCTCCGAGTGCCCCACAGCTACGAGGTCCGCCTCACGCCCTATACCACTTTCGGGGCTGGAGATACGGCCTCCCGCATCATCCACTACACAGAGCCCATCAACTCTCCCAATCTGTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGCGGCTACACCCAGGACCTGACAGACAACTTTGACTGGACCCGGCAGAATGCCCTCACCCAGAACCCCAAGCGCTCCCCCAACACTGGTCCCCCCACGGACATAAGTGGCACCCCTGAGGGCTACTACATGTTCATTGAGACATCAAGGCCCCGGGAGTTGGGGGACCGTGCGAGGTTGGTGAGTCCCCTGTACAACGCCAGCGCCAAGTTCTACTGCGTCTCCTTCTTCTACCACATGTACGGGAAGCATATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAGAGGGGCACTGGACACGCATGCCTGGTCCCTCAGTGGCAATAAGGGCAACGTGTGGCAGCAGGCGCATGTGCCCATCAACCCCAGCGGGCCCTTCCAGATTATTTTTGAGGGGGTTCGAGGCTCGGGCTACCTGGGGGATATCGCCATAGATGACGTCACACTGCAGAAGGGAGAGTGTCCCAGGAAGCAGATGGATCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCGCCTGGCAGCCCCGCCCACAGCTCTGGGGGCCCGTGGCCATCTTCCTCTTGGCGTTGCAGAGATGA

Related Sequences

bmy_05877T0 Protein

Length: 955 aa      View alignments
>bmy_05877T0
EGALDALWPRCLLSKPPRLPPAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLVLQCLVTGHPRPQVRWTKTAGSASDKFQETSVFNETLRIERIARTQGGRYYCKAENGVGVPAIKSIRVDVQYLDEPVLTVHQTVSDVRGNFYQEKTVFLRCTVNSNPPARFIWKRGSDTLSHSQDNGVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCGIPDKAVTFRLTNTTAPPALKLSVNETLVVNPGENVTVQCLLTGGDPLPQLQWSHGPGPLPLGALAQGGTLSIPSVQARDSGYYNCTATNNVGNPAKKTVNLLVRSMKNATFQITPDVIKESENIQLGQDLKLSCHVDAVPQEKVTYQWFKNGKPARMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLCVASFPGAPVPDLSVEVNISSETVPPTISVPKGRAVVTVREGSPAELQCEVRGKPRPPVLWSRVDKDAALLPSGLTLEETSDGKLRLERVSRDMSGTYRCQTARYNGFNVRPREAQVQLNVQFPPEVEPSSQDVRQALGRPVLLRCSLLRGSPQRISSAVWRFKGQLLPPPPAVPVAAEAPDHSELRLDAVTRDSSGSYECSVSNDVGSAACLFQVSAKAYSPEFYFDTPNPTRSHKLSKNYSYVLQWTQREPDAVDPVLNYRLSVRQLNQQNAMVKAIPVRHVEKGQLLEYILTDLRVPHSYEVRLTPYTTFGAGDTASRIIHYTEPINSPNLSDNTCHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNRGALDTHAWSLSGNKGNVWQQAHVPINPSGPFQIIFEGVRGSGYLGDIAIDDVTLQKGECPRKQMDPNKVVVMPGSGAAWQPRPQLWGPVAIFLLALQR*