Sequence detailsbmy_05877 (Coding sequence)

Part of scaffold_211 (SequenceType object (1))

For more information consult the page for scaffold_211 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MDGA1ENSTTRG00000001104 (Bottlenosed dolphin)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001037, Bottlenosed dolphin)

Protein Percentage 86.36%
cDNA percentage 87.2%
Ka/Ks Ratio 0.2876 (Ka = 0.0255, Ks = 0.0888)

MDGA1ENSBTAG00000005888 (Cow)

Gene Details

MAM domain-containing glycosylphosphatidylinositol anchor protein 1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044710, Cow)

Protein Percentage 95.6%
cDNA percentage 93.47%
Ka/Ks Ratio 0.07807 (Ka = 0.0238, Ks = 0.3044)

MDGA1 (Minke Whale)

Gene Details

MAM domain containing glycosylphosphatidylinositol anchor 1

External Links

Gene match (Identifier: BACU018017, Minke Whale)

Protein Percentage 98.92%
cDNA percentage 99.24%
Ka/Ks Ratio 0.19515 (Ka = 0.0045, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

MDGA1 (Human)   Mdga1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2865 bp    Location:1516638..1492153   Strand:-
Raw sequence 
>bmy_05877
GAGGGAGCCTTAGACGCCCTCTGGCCTCGGTGCCTCCTGTCTAAACCTCCCCGTCTCCCACCAGCTCCAGCCCAGGCTCAGATTGTGCACGCGGGCCAGGCGTGTGTGGTGAAAGAGGACAACATCAGTGAGCGCGTCTACACCATCCGGGAGGGGGACACCTTGGTGCTGCAGTGCCTGGTCACCGGGCACCCTCGGCCCCAGGTGCGTTGGACCAAGACCGCGGGCAGCGCGTCAGACAAGTTCCAGGAGACGTCGGTGTTCAATGAGACACTGCGCATCGAGCGCATCGCGCGCACGCAGGGCGGCCGCTACTACTGCAAGGCCGAGAACGGCGTGGGCGTGCCTGCCATCAAGTCCATCCGGGTGGACGTGCAGTACCTGGACGAGCCAGTGCTGACAGTACACCAGACAGTGAGTGATGTTCGAGGCAACTTCTACCAGGAGAAGACGGTGTTCCTGCGCTGTACGGTCAACTCCAACCCACCTGCCCGCTTCATCTGGAAGCGGGGCTCGGACACCTTGTCTCACAGCCAGGACAATGGGGTCGACATCTATGAGCCCCTCTACACCCAGGGGGAGACCAAGGTCCTGAAGCTGAAGAACCTGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGGTGTCTGTACGCAACGTGTGTGGCATCCCGGACAAGGCCGTCACCTTCCGGCTCACCAACACCACGGCACCACCAGCCCTGAAGCTGTCTGTGAACGAAACTCTGGTGGTGAACCCTGGGGAGAATGTGACGGTACAGTGTCTGCTGACAGGCGGTGATCCCCTGCCCCAGCTGCAGTGGTCCCATGGACCAGGCCCGCTGCCCCTGGGTGCCCTGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGCAGGCCCGAGACTCTGGCTACTACAACTGCACAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCTCCTGGTGCGATCCATGAAGAATGCCACATTCCAGATCACCCCAGATGTGATCAAAGAGAGCGAGAACATACAGCTGGGCCAGGACCTGAAGCTGTCATGCCATGTGGATGCAGTGCCCCAGGAGAAGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCAGCGCGCATGTCCAAGAGGCTGCTGGTGACTCGCAATGACCCTGAGTTGCCCGCTGTCACCAGCAGCCTAGAGCTCATTGACCTACACTTCAGCGACTACGGCACCTATCTGTGTGTGGCTTCCTTCCCGGGGGCACCTGTGCCCGACCTGAGCGTCGAGGTCAACATCTCCTCTGAGACAGTGCCTCCCACCATCAGCGTGCCCAAGGGCAGGGCCGTGGTGACCGTGCGCGAGGGCTCGCCCGCCGAGCTGCAGTGCGAGGTGCGGGGCAAGCCGCGGCCGCCTGTGCTTTGGTCCCGTGTGGACAAGGACGCTGCGTTGCTGCCCTCGGGGCTGACCCTCGAGGAGACCTCGGACGGGAAGCTGCGGCTGGAGCGCGTGAGCCGCGACATGAGTGGGACCTACCGCTGCCAGACGGCTCGCTATAATGGCTTCAACGTGCGCCCCCGCGAGGCCCAGGTGCAGCTGAACGTGCAGTTCCCGCCGGAGGTGGAGCCCAGCTCCCAGGACGTGCGCCAGGCACTGGGCCGGCCAGTGCTGCTGCGCTGCTCGCTGCTTCGAGGCAGCCCCCAGCGCATCTCCTCGGCTGTGTGGCGCTTCAAAGGGCAACTGCTGCCTCCGCCGCCTGCTGTCCCCGTCGCCGCCGAGGCCCCCGACCACTCCGAGCTGCGCCTCGACGCCGTCACCCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGACGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCTCGGCCAAAGCCTACAGCCCGGAGTTTTACTTCGACACCCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAATTACTCCTACGTGCTGCAGTGGACCCAGAGGGAGCCGGACGCTGTCGACCCTGTGCTCAACTACAGACTCAGTGTCCGCCAGTTGAATCAGCAAAACGCCATGGTGAAGGCCATCCCGGTGCGGCATGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGACCTCCGAGTGCCCCACAGCTACGAGGTCCGCCTCACGCCCTATACCACTTTCGGGGCTGGAGATACGGCCTCCCGCATCATCCACTACACAGAGCCCATCAACTCTCCCAATCTGTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGCGGCTACACCCAGGACCTGACAGACAACTTTGACTGGACCCGGCAGAATGCCCTCACCCAGAACCCCAAGCGCTCCCCCAACACTGGTCCCCCCACGGACATAAGTGGCACCCCTGAGGGCTACTACATGTTCATTGAGACATCAAGGCCCCGGGAGTTGGGGGACCGTGCGAGGTTGGTGAGTCCCCTGTACAACGCCAGCGCCAAGTTCTACTGCGTCTCCTTCTTCTACCACATGTACGGGAAGCATATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAGAGGGGCACTGGACACGCATGCCTGGTCCCTCAGTGGCAATAAGGGCAACGTGTGGCAGCAGGCGCATGTGCCCATCAACCCCAGCGGGCCCTTCCAGATTATTTTTGAGGGGGTTCGAGGCTCGGGCTACCTGGGGGATATCGCCATAGATGACGTCACACTGCAGAAGGGAGAGTGTCCCAGGAAGCAGATGGATCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCGCCTGGCAGCCCCGCCCACAGCTCTGGGGGCCCGTGGCCATCTTCCTCTTGGCGTTGCAGAGATGA

Related Sequences

bmy_05877T0 SequenceType object (3)

Length: 955 aa      View alignments
>bmy_05877T0
EGALDALWPRCLLSKPPRLPPAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLVLQCLVTGHPRPQVRWTKTAGSASDKFQETSVFNETLRIERIARTQGGRYYCKAENGVGVPAIKSIRVDVQYLDEPVLTVHQTVSDVRGNFYQEKTVFLRCTVNSNPPARFIWKRGSDTLSHSQDNGVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCGIPDKAVTFRLTNTTAPPALKLSVNETLVVNPGENVTVQCLLTGGDPLPQLQWSHGPGPLPLGALAQGGTLSIPSVQARDSGYYNCTATNNVGNPAKKTVNLLVRSMKNATFQITPDVIKESENIQLGQDLKLSCHVDAVPQEKVTYQWFKNGKPARMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLCVASFPGAPVPDLSVEVNISSETVPPTISVPKGRAVVTVREGSPAELQCEVRGKPRPPVLWSRVDKDAALLPSGLTLEETSDGKLRLERVSRDMSGTYRCQTARYNGFNVRPREAQVQLNVQFPPEVEPSSQDVRQALGRPVLLRCSLLRGSPQRISSAVWRFKGQLLPPPPAVPVAAEAPDHSELRLDAVTRDSSGSYECSVSNDVGSAACLFQVSAKAYSPEFYFDTPNPTRSHKLSKNYSYVLQWTQREPDAVDPVLNYRLSVRQLNQQNAMVKAIPVRHVEKGQLLEYILTDLRVPHSYEVRLTPYTTFGAGDTASRIIHYTEPINSPNLSDNTCHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNRGALDTHAWSLSGNKGNVWQQAHVPINPSGPFQIIFEGVRGSGYLGDIAIDDVTLQKGECPRKQMDPNKVVVMPGSGAAWQPRPQLWGPVAIFLLALQR*