Sequence details bmy_05883 (Coding sequence)

Part of scaffold_214 (Scaffold)

For more information consult the page for scaffold_214 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RCOR1 ENSTTRG00000013822 (Bottlenosed dolphin)

Gene Details

REST corepressor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013115, Bottlenosed dolphin)

Protein Percentage 86.06%
cDNA percentage 87.94%
Ka/Ks Ratio 0.46715 (Ka = 0.0783, Ks = 0.1676)

RCOR1 ENSBTAG00000002336 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003016, Cow)

Protein Percentage 98.08%
cDNA percentage 94.87%
Ka/Ks Ratio 0.04035 (Ka = 0.0086, Ks = 0.2139)

RCOR1  (Minke Whale)

Gene Details

REST corepressor 1

External Links

Gene match (Identifier: BACU006291, Minke Whale)

Protein Percentage 97.26%
cDNA percentage 96.8%
Ka/Ks Ratio 0.29666 (Ka = 0.0222, Ks = 0.0749)

Additional orthologs identified in other species via the OPTIC pipeline.

RCOR1 (Human)   Rcor1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1338 bp    Location:219201..353055   Strand:+
Raw sequence 
>bmy_05883
ATGGAAGGTTCTTTAGCAGAGGAGTGGCTTGATGAAATTGATGTTTGGAGTGACCTAGCTCCCACCTCGGTCCTGGCCAGTTCCAGCCCCTCTGGCCCTCCACTGGCCCCTGGCCAGTTCCAGCCCCATTCTCTGCGGCCCCGGAGCCTAGTGGAGTCTCTCAGTGTGCGGGAGAGGATGCAGTTCCTATGCAATGCTTGCCTGAGGCCCTTTGGTATCTTGCCCCAGCTGGTGAGAGCCAAACTAGCAAGACGCAGTCAAGAACGAGACAATCTTGGCATGCTGGTCTGGTCACCTAATCAGAATCTATCAGAAGCAAAATTGGATGAATACATTGCCATTGCCAAAGAGAAGCATGGGTACAACATGGAACAGGCTCTTGGGATGCTCTTTTGGCATAAGCATAATATTGAAAAATCATTGGCTGATTTGCCCAACTTTACCCCCTTCCCAGATGAGTGGACTGTGGAAGATAAAGTCTTATTTGAGCAAGCCTTTAGTTTTCACGGGAAAACTTTTCATAGAATCCAACAAATGCTTCCTGATAAATCTATAGCAAGTCTGGTGAAATTTTACTACTCCTGGAAGAAGACGAGAACTAAGACGAGCGTGATGGATCGCCACGCTCGGAGACAGAAGCGGGAGCGGGAGGAAAGTGAGGATGAGCTGGAAGAAACAAATGGAAATAACCCCATTGACATTGAGATTGATCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCCTACTGAGACAATTCCTCAGATCAAAAAAGAAAAACATAGTACACAAGCTAAAAATAGAGCAAAAAGGAAACCTCCGAAAGGAATGTTTCTTTCTCAAGAAGATGTGGAGGCTGTTTCTGCCAATGCCACTGCTGCTACCACGGTGCTGAGACAACTGGACATGGAGCTGGTGTCAATCAAACGACAGATTCAGAATATTAAACAGACGAACAGTGCTCTAAAAGAAAAACTTGATGGTGGAATAGAACCGTATCGACTTCCAGAGGTCATTCAGAAATGTAACGCGCGCTGGACCACAGAGGAGCAGCTGCTCGCCGTGCAAGCCATCAGGAAATATGGCCGAGATTTTCAGGCAATCTCAGATGTGATTGGGAACAAATCAGTGGTACAAGTGAAAAACTTTTTTGTAAATTATCGACGCCGCTTCAACATAGATGAAGTTTTACAAGAATGGGAGGCAGAACATGGGAAAGAAGAAACCAATGGTCCCAGTAACCAGAAACCTGTAACGTCCCCGGATAATTCTGTCAAGATGCCTGAAGAGGAGGACGAGGCTGCTTCTGTGCTTGACGTCAGATACGCATCTGCCTCATGA

Related Sequences

bmy_05883T0 Protein

Length: 446 aa      View alignments
>bmy_05883T0
MEGSLAEEWLDEIDVWSDLAPTSVLASSSPSGPPLAPGQFQPHSLRPRSLVESLSVRERMQFLCNACLRPFGILPQLVRAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARRQKREREESEDELEETNGNNPIDIEIDPNKESKKEVPPTETIPQIKKEKHSTQAKNRAKRKPPKGMFLSQEDVEAVSANATAATTVLRQLDMELVSIKRQIQNIKQTNSALKEKLDGGIEPYRLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAEHGKEETNGPSNQKPVTSPDNSVKMPEEEDEAASVLDVRYASAS*