Part of scaffold_214 (Scaffold)

For more information consult the page for scaffold_214 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XRCC3 ENSTTRG00000006460 (Bottlenosed dolphin)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006115, Bottlenosed dolphin)

Protein Percentage 64.78%
cDNA percentage 67.46%
Ka/Ks Ratio 0.46918 (Ka = 0.0783, Ks = 0.1668)

XRCC3 ENSBTAG00000009966 (Cow)

Gene Details

DNA repair protein XRCC3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013145, Cow)

Protein Percentage 82.39%
cDNA percentage 84.18%
Ka/Ks Ratio 0.17386 (Ka = 0.1043, Ks = 0.6)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1569 bp    Location:1180206..1169371   Strand:-
>bmy_05899
ATGCGCGTGGGTGGCAGGGTGCGTCTGCAGGGCGCCCTGGTCCATCGGACGGCCAAGGCGGGGTCTACTGGACACCCAGATCGCCATGGAGACACACTTAAGGGAACTCACACCGGAGAATGCAAAGCAGGCTCCACTCAGTTGGACCTGAATCCTAGAATTATTGCTGCAGTTAAGAAAGGTGTGTTTGCTGATGTTTATATAAAGTGGTTGTATAAAAGCATGAACGTACATACATACACACCTTATGTAGAACAGGCTTACAAGGTTGCCTGTCCGAGCCTTGGGGACCCTCTGGTTACTGACCCAGGACAGCCGGTGCTGATCAACGCCCTGATGCTGGAATGTGCCGCAGCCAAACTGAGGTCAGTAAAGGAGGTTCTGCATCTTTCTGGACCAGACCTGCAGAGGCTGACCCGCCTCTCCGGCCCCGACGTGCAGCGCTTGCTGAGGGCGGCCTCCTCACACCTGCGGGGAAGCAGCGTCTGCACAGCCCTCCAGCTGCTCCGGCAGAAGCGCCAGCGCCTGAGCCTGGGCTGCCCCGTGCTAGACGGGCTCCTCCGCGGCGGGCTGCCCCTGGAYGGCATCACCGAGCTGGCCGGACGCAGCTCCGCCGGGAAGACGCAGCTGGCGCTGCAGCTCTGCCTGGCCGTGCAGCTCCCGCGGCGACACGGAGGCCTGGGGGCCGGGGCCGTGTACGTGTGCACAGAGGACGCCTTCCCCAGCCGGCGTCTGCAGCAGCTCATCGCTCAGCAGCAGCGCCTGCGGACAGACGTCCCAGGGGACGTGGTCAGGAAAATCCAGTTTGGCCACCAGATCTTCATTGAGCACGCAGCCGACGTGGACACCCTGCTGGAGTGTGTGCGTAAGAAGGTGCCTGTGCTGCTGTCGCGGGGCATGGCCCGCCTGGTGGTCATCGACTCCGTGGCAGCCCCGTTCCGTTGTGAGTTCGACCAGGCGTCCTCGGCCCTCAGGGCCCGGCGTCTGCAGGCGCTGGGGGCCGAGCTGCGCCGGCTGAGCTGCACCTTCCGGAGCCCCGTGCTGTGCGTCAACCAGGTGGGCCCCCCTCCGCCCCCGGGGAGGGCGAGGCCAGGGGGGCCGGGCGGGGGCCGGGTCCTCACCGCCGCTGACCCCGATCTGGACCCTCCAGGTGACGGAATCCGCGGAGGAGCGGGGTGCAGCAGCTGGGCCCCCGGGGTGAGTGGGGCGCCCGAGGGCAGGGGTGGCGGGACCCGCGGTTCCACACACAGCACAGGACAGTCGGCTGTTTTCTGTCTCAGTGTCGTGGGAGAGCGGGTGTCTCCGGCCCTGGGAATAACCTGGTCCAACCAGCTCCTGGTGAGGCTGATGGCCGACCGGCAGCGCCCTGAGGAGGCCGCCTCCGCCCCGCCCCGCCGCACCCTGAGGGTGGTCTCCGCCCCCCACCTGCCGCCCTCGTCCTGTTCCTACACGGTCACCGCTGAGGGTGTGCGGGGACGCCTGGAACCGAGTCCTGCTGACATGTCGCCCTCCCCCTGGTTAGGGTCCCCTCATGTACCAGGGGCTGCGGGAAGCGCCCAGCATCCATAG

Related Sequences

bmy_05899T0 Protein

Length: 523 aa      View alignments
>bmy_05899T0
MRVGGRVRLQGALVHRTAKAGSTGHPDRHGDTLKGTHTGECKAGSTQLDLNPRIIAAVKKGVFADVYIKWLYKSMNVHTYTPYVEQAYKVACPSLGDPLVTDPGQPVLINALMLECAAAKLRSVKEVLHLSGPDLQRLTRLSGPDVQRLLRAASSHLRGSSVCTALQLLRQKRQRLSLGCPVLDGLLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPRRHGGLGAGAVYVCTEDAFPSRRLQQLIAQQQRLRTDVPGDVVRKIQFGHQIFIEHAADVDTLLECVRKKVPVLLSRGMARLVVIDSVAAPFRCEFDQASSALRARRLQALGAELRRLSCTFRSPVLCVNQVGPPPPPGRARPGGPGGGRVLTAADPDLDPPGDGIRGGAGCSSWAPGVSGAPEGRGGGTRGSTHSTGQSAVFCLSVVGERVSPALGITWSNQLLVRLMADRQRPEEAASAPPRRTLRVVSAPHLPPSSCSYTVTAEGVRGRLEPSPADMSPSPWLGSPHVPGAAGSAQHP*