Part of scaffold_213 (SequenceType object (1))

For more information consult the page for scaffold_213 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPHS1ENSTTRG00000003894 (Bottlenosed dolphin)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003667, Bottlenosed dolphin)

Protein Percentage 95.88%
cDNA percentage 95.97%
Ka/Ks Ratio 0.22042 (Ka = 0.011, Ks = 0.05)

NPHS1ENSBTAG00000007821 (Cow)

Gene Details

nephrin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010289, Cow)

Protein Percentage 93.29%
cDNA percentage 92.39%
Ka/Ks Ratio 0.15261 (Ka = 0.0339, Ks = 0.2218)

NPHS1 (Minke Whale)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene match (Identifier: BACU000611, Minke Whale)

Protein Percentage 99.18%
cDNA percentage 98.88%
Ka/Ks Ratio 0.1398 (Ka = 0.0038, Ks = 0.0275)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 3636 bp    Location:16071..1227   Strand:-
>bmy_05909
ATGGCTCTGAGGCTTCCCATCAGGACGCCGCTGCTCCTCATGGGGCTGCTGATGACAGGCCTGGCCCAGGTGCCAGTCCCTGCCTCAGCCCCCCGAGGCTTCTGGGCTCTGCCTGAAAACTTGACGGTGGTGGAGGGGGCTGCCGCTGAGCTGTGGTGTGGGGTCAGCGCCCCTGGCAGCACAGTCCAATGGGCCAAAGATGGGCTGCTCCTAGGCCCTGATCCTAGGATCCCCAGTTTCCCGCGGTATCGCCTGCAAGGGGACCCTACRAAAGTGCCCCCCAAGGTGCTTCAGCTGACCCCCGAGGCAGGGAGCACGGTCACGTGGGTAGCTGGGCAGGAGTACTTGGTCAGCTGTGTGTCTGGGGACGCAAAGCCAGCACCTGACATCACCTTCCTCCTGAGTGGACAAACAATTTCTGACATCTCCGCTAATGTGAATGAGGGATCCCAGGAGAAACTCTTCACCACAGAGGCCACAGCCAGGGTGACACCCCAGAGCTCGGATAAYGGGCAGTTACTGGTCTGTGAGGGGTCCAGCCCAGCTTTGGACACCCCTATCAAGGCTTCAATCACCATGAATGTTCTGTTCCCCCCAGGACCCCCTGTCATTGAGTGGCCAGGCCTGGACGAGGGGCACGCGAGGGCAGGGCAGAACTTGGAGCTGCTGTGCATGGCCCGAGGAGGGAATCCGCTAGCCACACTGCAGTGGCTGAAGAATGGCCAGCCAGTGTCCACAGCCTGGGGCACAGAGCACGCTCAGGCAGTGGCCCGCAGCATGTTAGTGATGATCGTGCGGCCGGAAGACCATGGGGCGAGGCTCAGCTGCGAGGCCTACAACAGCGTATCTACAGGGATCCAGGAACGCGGGGTCACGCTGCAGGTCACCTTTCCCCCCGGTGCCATTACCATCCTGGGATCTGCATCCCAGTCTGAGAACAAGAACGTGACACTCTCCTGCATCACCAAGTCCAGTCGCCCGAGGGGCCTGCATGGTGGCCACATCTCCATGTCTAACCTGACATTCCTGGCGCGACGGGAGGACAATGGTCTGACCCTCACGTGTGAGGCCTTTAGTGAGGCCTTCACCAAGGAGACCTTCAAGAAGTCACTCACCCTGAATGTGAAATGTGAGGCTCCACCCTCACCCGGGGGTGCCCCGTGCCTTAGAGACCCCCACCCTCAGGCCCCAGCCGGGAGAGAAAAGCCACTCTTCCTGGCTCTCCCCACAGATCCTGCCCAGAAGCTATGGATTGAGGGCCCCCCAGAGGGGCAGCGTCTCCGGGCTGGGACCCGGGTGAGGCTGGTATGTTTGGCCATTGGAGGCAATCCAGACCCTTCCCTCACCTGGTACAAGGACTCGCGCACAGTGACCGAACCGCGGCCGCCCCAGGAGCCACGGCGGGTGCAGCTGGGAAGTCTGGAGAAGTCCGGGAGCACCTTCTCCCGAGAGCTGGTACTGATCACCGGTCCGTCGGACAACCAGGCCAAGTTCACGTGCAAAGCCGGCCAGCTCAGCGCGTCCACGCAGCTTGTGGTGCAGTTCCCCCCAACTAATGTGACGATCCTGGCCAACGCGTCGGCGCTGCGCCCCGGGGATGCCTTAAACTTGACGTGCGTCAGCGTTAGCAGCAACCCTCCGGTCAACTTGTCGTGGGACAAGGAGGGGGAGAGGCTGGAGGGTGTGGCCGCCACGCCCCGGAGTGCTCCATTCAAAGGCTCCGCCGCCGCTAGGAGCGTCCTTCTGAGAATGTCATCCCGCGACCACGGCCACCGCGTGACCTGCCGTGCCCACAGCACCGAGCTACGGGAAACCGTGAGCGCGTTCTACCGCCTCAACGTGCTGTACCCTCCAGAGTTCCTGGGTGAGCAGGTGCTTGTGGTGACCGCGGTGGAGCAGGGCGAGGCACTGCTGCCCGTGTCCGTGTCTGCCAACCCCGCCCCRGAGGCCTTCAACTGGACCTTCCGCGGCTACCGCCTCAGCCCAGCTGGCGGCCCCCGGCATCGTATCCTGTCTGGTGGAGCTCTGCAGCTATGGAACGTGACCCGCGCTGACGATGGCCTCTACCAGCTGCACTGCCAGAACTCAGAGGGCACCGCTGAAGCTCTAGTGAGGCTGGATGTACACTATGCTCCCATCATCCGAGCTCTCCAAGACCCCACTGAAGTGAATATTGGGGGCTCTGTGGACATAGGAGAAGAGGAGGAGGACCAGAGCCTGGATGACATGGAGAAGATATCAAAGGGGTCCACAGGGCGTCTTCGGATTCACCACGCCAAGTTGACCCAGGCTGGTGCTTACCAGTGCATTGTGGACAATGGGGTGGCACCTCCAGCCAGAGGGCTGGTCCGTCTTGTTGTCAGATTTGCCCCCCACGTGGAGCATCCCTCTCCTCTAACTAAAGTGGCTGCAGCTGGAGACAGCACTAGTTCTGCCACCCTCCACTGTCGTGCCCGAGGTGTCCCCAATATYGTCTTCACTTGGACCAAAAACGGGGTCCCTCTGGATCTCCAGGATCCCAGGTACACAGAGCACACATACCACCAGAGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCCGCAGCCCAGGATTATGCCCTCTTCACGTGCACAGCCACCAACCCCCTCGGCTCGGACCACACCGATATTCAACTCGTCAGCATCAGCCGCCCTGATCCGCCATTGGGATTGAAGGTCGTGAGCATGACCCCATACTCGGTGGGGCTGGAGTGGAAGCCTGGCTTTGATGGGGGCTTGCCACAAAGTTTCCAAGTCAGGTATGAGGCTCTGGGGACTCTAGGGTTCCTCTACATGAATGTCCTACCACCCCAGGCCACCACCTTCACACTGACTGGGCTGCAGCCTTCTACGCGATACAGGGTCTGGTTGCTGGCCAGCAATGCCCTGGGCGACAGTGGACTAGCTGACAAAGGGTCCCAGATCTCAGTCACCACTCCAGGTCTAGACCAACCTTCTGGAGAACCTGACTACCAGCTGCCTACAGAGCAGCCTGCAGGCAAGTCCTCAATCCCCAAACACCCTCTCTCTCCTGGAAAAAACTTTCTGGTCTCTAACCCCACCTCCTCTTCCTTTCTAAAACCAGTTGTCCCCACAGGACCCTCCAAGCTGCCCCTGCTGCCTGTGCTGTTTGCTGTTGGGGGCCTTCTGCTGCTTTCTAACGCCTCCTGTGTCGGGGGATTCCTCTGGCAGCGGAGACTGAAGCGTCTTGCTGAGGGCATCTCAGAGAAGACAGAGGCAGGGAAGACTCTGGGGAGGAGGATTGAGGGAGACGGCTGTCAGAGGGTCAACATCCAGCTGCCCCCATGCCTCCATCCTGGAAGGTCGGAGGAAGACCGAGTCAAGAATGAATACGAGGAGAGCCAGTGGACTGGAGACCATGACACTCGAAGCTCCATGGTTAGCACAACAGATGTAGAGCCATATTACCACTCCATGAGGGACTTCAGTCCCCAGCTGCCCCCCACGCTGGAGGAGGTGTCTTATCCCCGAGGTCTCACAGGTCTTGAGGAGGAGAATATGACTTTTCCTGGGCACGTGTATGATGAGGTGGAAAGACTGTACGCCCCGTCTGGGGCCTGGGGACCCCTCTACGATGAAGTACCGATG

Related Sequences

bmy_05909T0 SequenceType object (3)

Length: 1212 aa      View alignments
>bmy_05909T0
MALRLPIRTPLLLMGLLMTGLAQVPVPASAPRGFWALPENLTVVEGAAAELWCGVSAPGSTVQWAKDGLLLGPDPRIPSFPRYRLQGDPTKVPPKVLQLTPEAGSTVTWVAGQEYLVSCVSGDAKPAPDITFLLSGQTISDISANVNEGSQEKLFTTEATARVTPQSSDNGQLLVCEGSSPALDTPIKASITMNVLFPPGPPVIEWPGLDEGHARAGQNLELLCMARGGNPLATLQWLKNGQPVSTAWGTEHAQAVARSMLVMIVRPEDHGARLSCEAYNSVSTGIQERGVTLQVTFPPGAITILGSASQSENKNVTLSCITKSSRPRGLHGGHISMSNLTFLARREDNGLTLTCEAFSEAFTKETFKKSLTLNVKCEAPPSPGGAPCLRDPHPQAPAGREKPLFLALPTDPAQKLWIEGPPEGQRLRAGTRVRLVCLAIGGNPDPSLTWYKDSRTVTEPRPPQEPRRVQLGSLEKSGSTFSRELVLITGPSDNQAKFTCKAGQLSASTQLVVQFPPTNVTILANASALRPGDALNLTCVSVSSNPPVNLSWDKEGERLEGVAATPRSAPFKGSAAARSVLLRMSSRDHGHRVTCRAHSTELRETVSAFYRLNVLYPPEFLGEQVLVVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSGGALQLWNVTRADDGLYQLHCQNSEGTAEALVRLDVHYAPIIRALQDPTEVNIGGSVDIGEEEEDQSLDDMEKISKGSTGRLRIHHAKLTQAGAYQCIVDNGVAPPARGLVRLVVRFAPHVEHPSPLTKVAAAGDSTSSATLHCRARGVPNIVFTWTKNGVPLDLQDPRYTEHTYHQSGVHSSLLTIANVSAAQDYALFTCTATNPLGSDHTDIQLVSISRPDPPLGLKVVSMTPYSVGLEWKPGFDGGLPQSFQVRYEALGTLGFLYMNVLPPQATTFTLTGLQPSTRYRVWLLASNALGDSGLADKGSQISVTTPGLDQPSGEPDYQLPTEQPAGKSSIPKHPLSPGKNFLVSNPTSSSFLKPVVPTGPSKLPLLPVLFAVGGLLLLSNASCVGGFLWQRRLKRLAEGISEKTEAGKTLGRRIEGDGCQRVNIQLPPCLHPGRSEEDRVKNEYEESQWTGDHDTRSSMVSTTDVEPYYHSMRDFSPQLPPTLEEVSYPRGLTGLEEENMTFPGHVYDEVERLYAPSGAWGPLYDEVPM