Part of scaffold_213 (Scaffold)

For more information consult the page for scaffold_213 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPHS1 ENSTTRG00000003894 (Bottlenosed dolphin)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003667, Bottlenosed dolphin)

Protein Percentage 95.88%
cDNA percentage 95.97%
Ka/Ks Ratio 0.22042 (Ka = 0.011, Ks = 0.05)

NPHS1 ENSBTAG00000007821 (Cow)

Gene Details

nephrin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010289, Cow)

Protein Percentage 93.29%
cDNA percentage 92.39%
Ka/Ks Ratio 0.15261 (Ka = 0.0339, Ks = 0.2218)

NPHS1  (Minke Whale)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene match (Identifier: BACU000611, Minke Whale)

Protein Percentage 99.18%
cDNA percentage 98.88%
Ka/Ks Ratio 0.1398 (Ka = 0.0038, Ks = 0.0275)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3636 bp    Location:16071..1227   Strand:-
>bmy_05909
ATGGCTCTGAGGCTTCCCATCAGGACGCCGCTGCTCCTCATGGGGCTGCTGATGACAGGCCTGGCCCAGGTGCCAGTCCCTGCCTCAGCCCCCCGAGGCTTCTGGGCTCTGCCTGAAAACTTGACGGTGGTGGAGGGGGCTGCCGCTGAGCTGTGGTGTGGGGTCAGCGCCCCTGGCAGCACAGTCCAATGGGCCAAAGATGGGCTGCTCCTAGGCCCTGATCCTAGGATCCCCAGTTTCCCGCGGTATCGCCTGCAAGGGGACCCTACRAAAGTGCCCCCCAAGGTGCTTCAGCTGACCCCCGAGGCAGGGAGCACGGTCACGTGGGTAGCTGGGCAGGAGTACTTGGTCAGCTGTGTGTCTGGGGACGCAAAGCCAGCACCTGACATCACCTTCCTCCTGAGTGGACAAACAATTTCTGACATCTCCGCTAATGTGAATGAGGGATCCCAGGAGAAACTCTTCACCACAGAGGCCACAGCCAGGGTGACACCCCAGAGCTCGGATAAYGGGCAGTTACTGGTCTGTGAGGGGTCCAGCCCAGCTTTGGACACCCCTATCAAGGCTTCAATCACCATGAATGTTCTGTTCCCCCCAGGACCCCCTGTCATTGAGTGGCCAGGCCTGGACGAGGGGCACGCGAGGGCAGGGCAGAACTTGGAGCTGCTGTGCATGGCCCGAGGAGGGAATCCGCTAGCCACACTGCAGTGGCTGAAGAATGGCCAGCCAGTGTCCACAGCCTGGGGCACAGAGCACGCTCAGGCAGTGGCCCGCAGCATGTTAGTGATGATCGTGCGGCCGGAAGACCATGGGGCGAGGCTCAGCTGCGAGGCCTACAACAGCGTATCTACAGGGATCCAGGAACGCGGGGTCACGCTGCAGGTCACCTTTCCCCCCGGTGCCATTACCATCCTGGGATCTGCATCCCAGTCTGAGAACAAGAACGTGACACTCTCCTGCATCACCAAGTCCAGTCGCCCGAGGGGCCTGCATGGTGGCCACATCTCCATGTCTAACCTGACATTCCTGGCGCGACGGGAGGACAATGGTCTGACCCTCACGTGTGAGGCCTTTAGTGAGGCCTTCACCAAGGAGACCTTCAAGAAGTCACTCACCCTGAATGTGAAATGTGAGGCTCCACCCTCACCCGGGGGTGCCCCGTGCCTTAGAGACCCCCACCCTCAGGCCCCAGCCGGGAGAGAAAAGCCACTCTTCCTGGCTCTCCCCACAGATCCTGCCCAGAAGCTATGGATTGAGGGCCCCCCAGAGGGGCAGCGTCTCCGGGCTGGGACCCGGGTGAGGCTGGTATGTTTGGCCATTGGAGGCAATCCAGACCCTTCCCTCACCTGGTACAAGGACTCGCGCACAGTGACCGAACCGCGGCCGCCCCAGGAGCCACGGCGGGTGCAGCTGGGAAGTCTGGAGAAGTCCGGGAGCACCTTCTCCCGAGAGCTGGTACTGATCACCGGTCCGTCGGACAACCAGGCCAAGTTCACGTGCAAAGCCGGCCAGCTCAGCGCGTCCACGCAGCTTGTGGTGCAGTTCCCCCCAACTAATGTGACGATCCTGGCCAACGCGTCGGCGCTGCGCCCCGGGGATGCCTTAAACTTGACGTGCGTCAGCGTTAGCAGCAACCCTCCGGTCAACTTGTCGTGGGACAAGGAGGGGGAGAGGCTGGAGGGTGTGGCCGCCACGCCCCGGAGTGCTCCATTCAAAGGCTCCGCCGCCGCTAGGAGCGTCCTTCTGAGAATGTCATCCCGCGACCACGGCCACCGCGTGACCTGCCGTGCCCACAGCACCGAGCTACGGGAAACCGTGAGCGCGTTCTACCGCCTCAACGTGCTGTACCCTCCAGAGTTCCTGGGTGAGCAGGTGCTTGTGGTGACCGCGGTGGAGCAGGGCGAGGCACTGCTGCCCGTGTCCGTGTCTGCCAACCCCGCCCCRGAGGCCTTCAACTGGACCTTCCGCGGCTACCGCCTCAGCCCAGCTGGCGGCCCCCGGCATCGTATCCTGTCTGGTGGAGCTCTGCAGCTATGGAACGTGACCCGCGCTGACGATGGCCTCTACCAGCTGCACTGCCAGAACTCAGAGGGCACCGCTGAAGCTCTAGTGAGGCTGGATGTACACTATGCTCCCATCATCCGAGCTCTCCAAGACCCCACTGAAGTGAATATTGGGGGCTCTGTGGACATAGGAGAAGAGGAGGAGGACCAGAGCCTGGATGACATGGAGAAGATATCAAAGGGGTCCACAGGGCGTCTTCGGATTCACCACGCCAAGTTGACCCAGGCTGGTGCTTACCAGTGCATTGTGGACAATGGGGTGGCACCTCCAGCCAGAGGGCTGGTCCGTCTTGTTGTCAGATTTGCCCCCCACGTGGAGCATCCCTCTCCTCTAACTAAAGTGGCTGCAGCTGGAGACAGCACTAGTTCTGCCACCCTCCACTGTCGTGCCCGAGGTGTCCCCAATATYGTCTTCACTTGGACCAAAAACGGGGTCCCTCTGGATCTCCAGGATCCCAGGTACACAGAGCACACATACCACCAGAGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCCGCAGCCCAGGATTATGCCCTCTTCACGTGCACAGCCACCAACCCCCTCGGCTCGGACCACACCGATATTCAACTCGTCAGCATCAGCCGCCCTGATCCGCCATTGGGATTGAAGGTCGTGAGCATGACCCCATACTCGGTGGGGCTGGAGTGGAAGCCTGGCTTTGATGGGGGCTTGCCACAAAGTTTCCAAGTCAGGTATGAGGCTCTGGGGACTCTAGGGTTCCTCTACATGAATGTCCTACCACCCCAGGCCACCACCTTCACACTGACTGGGCTGCAGCCTTCTACGCGATACAGGGTCTGGTTGCTGGCCAGCAATGCCCTGGGCGACAGTGGACTAGCTGACAAAGGGTCCCAGATCTCAGTCACCACTCCAGGTCTAGACCAACCTTCTGGAGAACCTGACTACCAGCTGCCTACAGAGCAGCCTGCAGGCAAGTCCTCAATCCCCAAACACCCTCTCTCTCCTGGAAAAAACTTTCTGGTCTCTAACCCCACCTCCTCTTCCTTTCTAAAACCAGTTGTCCCCACAGGACCCTCCAAGCTGCCCCTGCTGCCTGTGCTGTTTGCTGTTGGGGGCCTTCTGCTGCTTTCTAACGCCTCCTGTGTCGGGGGATTCCTCTGGCAGCGGAGACTGAAGCGTCTTGCTGAGGGCATCTCAGAGAAGACAGAGGCAGGGAAGACTCTGGGGAGGAGGATTGAGGGAGACGGCTGTCAGAGGGTCAACATCCAGCTGCCCCCATGCCTCCATCCTGGAAGGTCGGAGGAAGACCGAGTCAAGAATGAATACGAGGAGAGCCAGTGGACTGGAGACCATGACACTCGAAGCTCCATGGTTAGCACAACAGATGTAGAGCCATATTACCACTCCATGAGGGACTTCAGTCCCCAGCTGCCCCCCACGCTGGAGGAGGTGTCTTATCCCCGAGGTCTCACAGGTCTTGAGGAGGAGAATATGACTTTTCCTGGGCACGTGTATGATGAGGTGGAAAGACTGTACGCCCCGTCTGGGGCCTGGGGACCCCTCTACGATGAAGTACCGATG

Related Sequences

bmy_05909T0 Protein

Length: 1212 aa      View alignments
>bmy_05909T0
MALRLPIRTPLLLMGLLMTGLAQVPVPASAPRGFWALPENLTVVEGAAAELWCGVSAPGSTVQWAKDGLLLGPDPRIPSFPRYRLQGDPTKVPPKVLQLTPEAGSTVTWVAGQEYLVSCVSGDAKPAPDITFLLSGQTISDISANVNEGSQEKLFTTEATARVTPQSSDNGQLLVCEGSSPALDTPIKASITMNVLFPPGPPVIEWPGLDEGHARAGQNLELLCMARGGNPLATLQWLKNGQPVSTAWGTEHAQAVARSMLVMIVRPEDHGARLSCEAYNSVSTGIQERGVTLQVTFPPGAITILGSASQSENKNVTLSCITKSSRPRGLHGGHISMSNLTFLARREDNGLTLTCEAFSEAFTKETFKKSLTLNVKCEAPPSPGGAPCLRDPHPQAPAGREKPLFLALPTDPAQKLWIEGPPEGQRLRAGTRVRLVCLAIGGNPDPSLTWYKDSRTVTEPRPPQEPRRVQLGSLEKSGSTFSRELVLITGPSDNQAKFTCKAGQLSASTQLVVQFPPTNVTILANASALRPGDALNLTCVSVSSNPPVNLSWDKEGERLEGVAATPRSAPFKGSAAARSVLLRMSSRDHGHRVTCRAHSTELRETVSAFYRLNVLYPPEFLGEQVLVVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSGGALQLWNVTRADDGLYQLHCQNSEGTAEALVRLDVHYAPIIRALQDPTEVNIGGSVDIGEEEEDQSLDDMEKISKGSTGRLRIHHAKLTQAGAYQCIVDNGVAPPARGLVRLVVRFAPHVEHPSPLTKVAAAGDSTSSATLHCRARGVPNIVFTWTKNGVPLDLQDPRYTEHTYHQSGVHSSLLTIANVSAAQDYALFTCTATNPLGSDHTDIQLVSISRPDPPLGLKVVSMTPYSVGLEWKPGFDGGLPQSFQVRYEALGTLGFLYMNVLPPQATTFTLTGLQPSTRYRVWLLASNALGDSGLADKGSQISVTTPGLDQPSGEPDYQLPTEQPAGKSSIPKHPLSPGKNFLVSNPTSSSFLKPVVPTGPSKLPLLPVLFAVGGLLLLSNASCVGGFLWQRRLKRLAEGISEKTEAGKTLGRRIEGDGCQRVNIQLPPCLHPGRSEEDRVKNEYEESQWTGDHDTRSSMVSTTDVEPYYHSMRDFSPQLPPTLEEVSYPRGLTGLEEENMTFPGHVYDEVERLYAPSGAWGPLYDEVPM