Part of scaffold_213 (Scaffold)

For more information consult the page for scaffold_213 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APLP1 ENSTTRG00000003905 (Bottlenosed dolphin)

Gene Details

amyloid beta (A4) precursor-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003676, Bottlenosed dolphin)

Protein Percentage 92.74%
cDNA percentage 93.15%
Ka/Ks Ratio 0.46395 (Ka = 0.0573, Ks = 0.1235)

BT.56047 ENSBTAG00000001151 (Cow)

Gene Details

amyloid-like protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001531, Cow)

Protein Percentage 87.94%
cDNA percentage 88.15%
Ka/Ks Ratio 0.27134 (Ka = 0.083, Ks = 0.3057)

APLP1  (Minke Whale)

Gene Details

amyloid beta (A4) precursor-like protein 1

External Links

Gene match (Identifier: BACU000613, Minke Whale)

Protein Percentage 93.36%
cDNA percentage 94.67%
Ka/Ks Ratio 0.87202 (Ka = 0.0543, Ks = 0.0623)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1686 bp    Location:29008..38376   Strand:+
>bmy_05911
ATGGGACCCGCCAGCCCAGCCGCTCGCGGTCTGGGCCCGCTGCCGCTGTTGCTGCCACTATTGCTGCTGCTTCTGCGCGCGCAGCTCGCCGTCGGGAGCCTGGCCGGTGGGAGTCCCAGCGCTGCCGAGGCCCCAGGGTCTGCTCAGGTGGCTGGACTATGCGGGCGCCCAACCCTTCACCGGGACCTGCGTACCGGCCGCTGGGAACCAGACCCACAGCTCTCACGACGCTGTCTCCGGGACCCGCAACGCGTGCTGGAGTACTGCAGACAGATGTACCCGGAGCTGCAGATTGCACGTGTGGAACAGGCGACGCAGGCCATCCCCGTGGAGCAATGGTGCGGGGATGCCTGGGGTGGCCGCTGTGCCCACCCCCACCACCAGGTTGTGCCTTTCCGCTGCCTGGAGGGTGAATTTGTGAGCGAGGCCCTGCTGGTGCCTGAAGGCTGCCGGTTCTTGCACCAGGAGCGCATGGACCAGTGCGAGAGTTCAACCCGGAGGCGTCAGGAGGCACAGGAGGTCAGGACCCAGCCCACTCGCCTTCACCCCCCCAGAACCCAGGGGTCCAGTCCTCTAACACCCTCCTCCTCCAGAACCCAAGAGTCTGGGCCTCAGCCCTCTCTTCCCAATGGGACAGAACCAGGAATCCAGGCTCCCAGCCCCATCAGCCCCCAAGACCCAGGCATCCAGGCTCTCCCTCTACCCTCTGTTACCCCACAGTCCTGGCATCTGGGCCCACTCTTCCCGCAGGCCTGCAGCTCCCAGGGCCTCATCCTGCATGGCTCGGGCATGCTTTTGCCCTGTGGCGCGGATCGGTTCCGAGGTGTGGAGTATGTGTGCTGCCCCCCTCCAGTGACCCCCAACCCGTCTGGGACAGCAGTTGGTGATCCTTCCACTCGGTCGTGGCCTCCCGGGGGCAGAGTTGAGGGGGGTGAGGATGAGGAAGAGGAGGAATCCTTCCTACAGCCAGTAGATGATTACTTTGTGGAGCCCCCACGGGCTGAAGAGGAAGAAGAGGAGGAAAGAGTCCCACCCTCAAGCTCCCATCCCCCTTCAGGGGTCAGCAAAGTGACTCCCACCCCGAGGCCCACAGATGGTGTGGACGTGTACTTTGGCATGCCTGGAGAAATCAGCGAGCATGAGGGGTTCCTGCGGGCCAAGATGGATCTGGAGGAGCGCAGGATGCGTCAGATTAACGAGGTGATGGTGATGCGTGAATGGGCCATGGCGGACAACCAGTCCAAGAACCTGCCTAAAGCCGACAGACAGGCCCTGAATGAGCACTTCCAGTCCATTCTGCAGACCCTGGAGGAGCAGGTGTCTGGTGAGCGACAGCGCCTGGTGGAGACCCATGCCACCCGAGTCATTGCCCTTATCAACGACCAGCGCCGGGCTGCCTTGGAAGGTTTCCTGGCGGCACTGCAGGCGGATCCGCCTCAGCCAGAGCGAGTCCTGCTGGCCCTGCGGCGCTACCTGCGAGCAGAGCGGAAGGAGCAAAGGCACACGCTGAGGCACTACCAGCACGTGGCTGCTGTGGACCCCGAGAAGGCCCAGCAGACGCGCTTCCAGAGGAACTCCTCCACTCTGAACACCTGGGCCCCAGTGAATTGGAAGCCCCTGCCCCGGGGGGCAGCAATGAGGACAAGGGTGGGCTACAGCCCCTGGATTCCAAGGATGGTGAGTTAA

Related Sequences

bmy_05911T0 Protein

Length: 562 aa      View alignments
>bmy_05911T0
MGPASPAARGLGPLPLLLPLLLLLLRAQLAVGSLAGGSPSAAEAPGSAQVAGLCGRPTLHRDLRTGRWEPDPQLSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPVEQWCGDAWGGRCAHPHHQVVPFRCLEGEFVSEALLVPEGCRFLHQERMDQCESSTRRRQEAQEVRTQPTRLHPPRTQGSSPLTPSSSRTQESGPQPSLPNGTEPGIQAPSPISPQDPGIQALPLPSVTPQSWHLGPLFPQACSSQGLILHGSGMLLPCGADRFRGVEYVCCPPPVTPNPSGTAVGDPSTRSWPPGGRVEGGEDEEEEESFLQPVDDYFVEPPRAEEEEEEERVPPSSSHPPSGVSKVTPTPRPTDGVDVYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMVMREWAMADNQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQPERVLLALRRYLRAERKEQRHTLRHYQHVAAVDPEKAQQTRFQRNSSTLNTWAPVNWKPLPRGAAMRTRVGYSPWIPRMVS*