Part of scaffold_213 (Scaffold)

For more information consult the page for scaffold_213 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRFN3 ENSTTRG00000003912 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and fibronectin type III domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003683, Bottlenosed dolphin)

Protein Percentage 92.82%
cDNA percentage 92.29%
Ka/Ks Ratio 0.15052 (Ka = 0.0113, Ks = 0.075)

LRFN3  (Minke Whale)

Gene Details

leucine rich repeat and fibronectin type III domain containing 3

External Links

Gene match (Identifier: BACU000615, Minke Whale)

Protein Percentage 98.25%
cDNA percentage 98.9%
Ka/Ks Ratio 0.323 (Ka = 0.0077, Ks = 0.0238)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1887 bp    Location:90964..95392   Strand:+
>bmy_05914
ATGGCCGTCCTCCCTCTGCTCCTCTGCCTGCTGCCGCTGGCCCCCGCCTCGTCTCCACCCCAGCCAGCCACACCCAGCCCGTGTCCCCGCCGCTGCCGCTGCCAGACACAGTCCCTGCCCCTAAGCGTGCTGTGCCCGGGGGCAGGCCTTCTGTTTGTTCCGCCCTCGCTGGACCGCCGGGCGGCCGAGCTGCGCCTGGCGGACAACTTCATCGCGACCGTGCGGCGCCGTGACCTGGCCAACATGACGGGCCTGCTGCACCTGAGCTTGTCACGCAACACCATCCGCCACGTGGCCGCCGGCGCCTTCGCTGACCTTCGCGCCCTGCGCGCTCTGCACCTGGACGGCAACCGGCTGACCTCGCTGGGTGAGGGGCAGCTGCGCGGCCTGGTCAACTTACGCCACCTCATCCTGAGCAACAACCAGCTGGCAGCCCTGGCGGCTGGGGCCCTGGACGACTGCGCTGAGACACTCGAGGACCTCGACCTCTCCTACAACAACCTCGAACAACTGCCCTGGGAGGCGCTGGGCCGCCTGGGCAACGTCAACACGCTGGGCCTCGACCACAACCTACTGGCTTCCGTGCCCGCCGGCGCCTTTTCCCGCCTGCACAAGCTGGCACGGCTGGACATGACCTCCAACCGCCTAACCACCATCCCACCCGACCCACTCTTCTCCCGCCTGCCGCTGCTGGCCAGGCCCCGCGGCTCCCCCGCGTCCGCCCTGGTGCTGGCCTTCGGCGGGAACCCCCTGCACTGCAACTGCGAGCTGGTGTGGCTCCGGCGGCTGGCGCGGGAGGACGACCTCGAGGCCTGCGCCTCCCCGCCGGCCCTGGGCGGCCGCTACTTCTGGGCTGTGGGTGAGGAAGAGTTTGTGTGCGAGCCCCCCGTGGTGACACACCGTTCGCCGCCCCTGGCTGTGCCTGCCGGTCGGCCAGCCGCCCTGCGCTGCCGGGCAGTGGGCGACCCCGAGCCCCGCGTGCGCTGGGTGTCACCCCAGGGCCGGCTGCTGGGCAACTCGAGCCGAGCTCGCGCCTTCCCTAACGGGACGCTGGAGCTGCTGGTCACCGAGCCGGGCGATGGTGGCATCTTTACCTGCATCGCGGCCAATGCAGCTGGCGAGGCCACGGCTGCTGTGGAGCTGACCGTGGGCCCCCCGCCGCCCCCCCAGCTAGCCAACAGCACAAGTTGTGACCCCCCGCGGGACGGGGATCCTGATGCCCTCACCCCGCCCTCTGCCGCCTCGGTCTCTGCCTCCGCCAAGGCGGCTGACGCTGGGCCCCCTACCGACCGTGGCGTCCAGGTGACTGAGCATGGGGCCACAGCTGCTCTAGTCCAGTGGTCAGATCAGCGGCCCATCCCAGGCATCCGCATGTACCAAATCCAGTACAACAGCTCAGCCGACGACATCCTCGTCTACAGGATGATCCCAGCCAACAGCAGCTCCTTCCTGTTGACGGACCTGGCGTCAGGCCGCACCTACGATCTGTGTGTGCTAGCCGTGTACGAGGACGGCGCCACGGGGCTGACAGCCACACGGCCCGTGGGCTGCCACCGCTTCTCCACTGAGCCAGCGCTGCAGCCCTGCGGGGCCCCACACGCACCCTTCCTGGGCGGCACTATGATCATCGCACTGGGTGGTGTTATCGTGGCCTCGGTACTGGTCTTCATCTTCGTGCTGCTCATGCGCTACAAGGTGCACGGTGGCCAACCCCCGGGCAAGGCCAAGGCACCTGCGCCTGTCAGCAGCGTTTGCTCCCAGACCAATGGCGCCCTGGGCCCCACGCTGGCCCCGCCGGCTCCTGAGCCGGCCGCACCCAGGGCCCACACCGTGGTCCAGCTGGACTGTGAGCCCTGGGGGCCCAGCCACGAACCCACGGGACCCTAG

Related Sequences

bmy_05914T0 Protein

Length: 629 aa     
>bmy_05914T0
MAVLPLLLCLLPLAPASSPPQPATPSPCPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIATVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLAFGGNPLHCNCELVWLRRLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPNGTLELLVTEPGDGGIFTCIAANAAGEATAAVELTVGPPPPPQLANSTSCDPPRDGDPDALTPPSAASVSASAKAADAGPPTDRGVQVTEHGATAALVQWSDQRPIPGIRMYQIQYNSSADDILVYRMIPANSSSFLLTDLASGRTYDLCVLAVYEDGATGLTATRPVGCHRFSTEPALQPCGAPHAPFLGGTMIIALGGVIVASVLVFIFVLLMRYKVHGGQPPGKAKAPAPVSSVCSQTNGALGPTLAPPAPEPAAPRAHTVVQLDCEPWGPSHEPTGP*