Part of scaffold_213 (Scaffold)

For more information consult the page for scaffold_213 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLIP3 ENSTTRG00000003915 (Bottlenosed dolphin)

Gene Details

CAP-GLY domain containing linker protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003685, Bottlenosed dolphin)

Protein Percentage 93.42%
cDNA percentage 93.72%
Ka/Ks Ratio 0.37115 (Ka = 0.0477, Ks = 0.1287)

CLIP3 ENSBTAG00000019674 (Cow)

Gene Details

CAP-Gly domain-containing linker protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026221, Cow)

Protein Percentage 93.24%
cDNA percentage 90.43%
Ka/Ks Ratio 0.15386 (Ka = 0.0476, Ks = 0.3092)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2409 bp    Location:141753..119868   Strand:-
>bmy_05916
ATGACTAAGACAGATCCCGCCCCGATGGCCCCGCCGCTCAGGGCGGAGGGAGAAGAGGAGGAGGAGGAGGATGAGCCTGTCCCAGAGCCCCCCAGCCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGCCCCCCTCCCCAAGGACTACGCCTTCACCTTCTTCGACCCCAACGACCCTGCCTGCCAGGAGATTCTGTTTGACCCGCAGACCACCATCCCTGAGCTGTTCGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAATGAGATTCTGCGTCGAGGCTGCCATGTGAATGATCGTGATGGGCTGACCGACATGACACTGCTCCATTATGCGTGCAAGGCGGGGGCCCACGGAGTCGGGGACCCCGCGGCGGCTGTACGCCTTTCGCAGCAGCTGCTGGCACTGGGCGCAGACGTGACCCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGGCCTATTTTGACGTGCCGGATCTCGTGCGCGTGCTACTGAAGGGTGCACGGCCCCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCATGGCTCAGCCTTGCATATCGCTGCCTCCAACCTGTGCCTGGGCGCGGCCAAATGTTTGCTGGAACACGGCGCCAACCCGGCGCTTCGGAACCGAAAGGGACAGGTGCCAGCGGAGGTGGTCCCAGACCCCATGGACATGTCCCTGGACAAGGCAGAGGCGGCGCTGGTGGCCAAGGAGCTGCGGACGCTACTGGAGGAGGCTGTGCCGCTCTCCTGCACCCTCCCCAAGGTCACGCTACCCAACTATGACAACGTCCCAGGCAATCTCATGCTCAGTGCACTGGGCCTGCGCCTGGGAGACCGCGTGCTACTGGATGGCCAGAAGACGGGCACGCTGCGGTTCTGCGGGACCACGGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGAACTGGATGAACCTGAGGGCAAGAATGATGGCAGTGTTGGGGGTGTCCGGTACTTCATCTGCCCTCCCAAGCAGGGTCAGTCCCACTGGGGCCCAGAAGGATGGTGGTGGGGTCCACTCAGTAGTTCTGATGCTGCTGCTGAGTGCTGGGGTTGGGAGGTGATGGGGGGGGGTCAGAGGGCAGAGGCTTGGACAACTCCCAGCCCAGGCTCTGTTCCCCCAGGTCTCTTTGCCTCTGTGTCCAAGATCTCCAAGGCAGTGGACGCACCTCCCTCATCCGTCACCTCCACACCTCGGACTCCCCGGATGGACTTCTCCCGTGTCACTGGCAAAGGCCGCAGGGAACACAAAGGTAAGAAGAAGCCCCCATCATCCCCGTCTCTGGGCAGCCTGCAGCAGCGTGAAGGAGCTAAGGCTGAGGTTGGAGACCAAGTCCTCGTCGCAGGCCAGAAGCAAGGGATCGTGCGTTTCTATGGGAAGACAGACTTTGCCCCAGGTTACTGGTACGGCATAGAGCTAGACCAGCCCACCGGCAAGCATGATGGCTCTGTCTTTGGTGTCCGGTACTTCACCTGCCCTCCACGGCATGGAGTCTTTGCACCAGCATCTCGAATTCAGAGGATTGGTGGATCCACTGACCCCCCTGGGGATAATGTTGGAGCCAAAAAAGTACATCAAGTGACAAGAATGACCGGGTACACGGACTTGATGTCAATGGAGGATCAGGACGCCAGGGTTCCAGCTCTGGAACCATTCAGGGTGGAGCAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTGCAAGGAAGAGGAGGAGTATTTGCTTCGACAGGTCTTCAATGCCCCAAAACCAAAGTGGACCCAGCTCTCCGGGAGGAAGTTACAGAACTGGGGTGGGCTCCCCCATCCCCGGGGGATGGTTCCTGAGCGGCTGCCACCGTGGCTCCAGCGTTACGTGGACAAAGTGTCTGACCTCAGCCTTTTTGGGGGTCTCCCAGCCAACCATGTCCTTGTGAACCAGTATCTGCCTGGGGAGGGCATCATGCCCCACGAGGATGGGCCACTGTACTACCCGACTGTCAGCACCATCAGCTTGGGCTCCCACACCATGCTGGACTTCTACGAGCCTCGGCAGCCAGAGGATGATGACCCGACAGAGCAGCCCCGGCCCCCGCCCCGGCCGGCCACCTCGCTGTTGCTTGAACCGCGCAGCCTGCTGGTGCTCCGTGGCACCGCCTACACGCGCCTCCTCCACGGCATCGCAGCCGCCAGCGTAGACGCGCTGGACGCCGCCTCACTGCCGCGCAACGCAGCCGCCTGCCCCTCGGCGCAGGCTGGAGCCCGCCTGGTCCGCGGCACCCGCGTCTCGCTGACCATCCGCCGCGTACCCCGCGTGCTGCGCGCTGGCCTCCTGCTCAGCAAGTGA

Related Sequences

bmy_05916T0 Protein

Length: 803 aa      View alignments
>bmy_05916T0
MTKTDPAPMAPPLRAEGEEEEEEDEPVPEPPSPTQERRQKPVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNEILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASNLCLGAAKCLLEHGANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCTLPKVTLPNYDNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGQSHWGPEGWWWGPLSSSDAAAECWGWEVMGGGQRAEAWTTPSPGSVPPGLFASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKPPSSPSLGSLQQREGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIGGSTDPPGDNVGAKKVHQVTRMTGYTDLMSMEDQDARVPALEPFRVEQAPPVIYYVPDFICKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSDLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTMLDFYEPRQPEDDDPTEQPRPPPRPATSLLLEPRSLLVLRGTAYTRLLHGIAAASVDALDAASLPRNAAACPSAQAGARLVRGTRVSLTIRRVPRVLRAGLLLSK*