Sequence detailsbmy_05916 (Coding sequence)

Part of scaffold_213 (SequenceType object (1))

For more information consult the page for scaffold_213 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLIP3ENSTTRG00000003915 (Bottlenosed dolphin)

Gene Details

CAP-GLY domain containing linker protein 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003685, Bottlenosed dolphin)

Protein Percentage 93.42%
cDNA percentage 93.72%
Ka/Ks Ratio 0.37115 (Ka = 0.0477, Ks = 0.1287)

CLIP3ENSBTAG00000019674 (Cow)

Gene Details

CAP-Gly domain-containing linker protein 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026221, Cow)

Protein Percentage 93.24%
cDNA percentage 90.43%
Ka/Ks Ratio 0.15386 (Ka = 0.0476, Ks = 0.3092)

Additional orthologs identified in other species via the OPTIC pipeline.

ALKBH6 (Human)   Alkbh6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2409 bp    Location:141753..119868   Strand:-
Raw sequence 
>bmy_05916
ATGACTAAGACAGATCCCGCCCCGATGGCCCCGCCGCTCAGGGCGGAGGGAGAAGAGGAGGAGGAGGAGGATGAGCCTGTCCCAGAGCCCCCCAGCCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGCCCCCCTCCCCAAGGACTACGCCTTCACCTTCTTCGACCCCAACGACCCTGCCTGCCAGGAGATTCTGTTTGACCCGCAGACCACCATCCCTGAGCTGTTCGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATTGATGTCATTGGCAATGAGATTCTGCGTCGAGGCTGCCATGTGAATGATCGTGATGGGCTGACCGACATGACACTGCTCCATTATGCGTGCAAGGCGGGGGCCCACGGAGTCGGGGACCCCGCGGCGGCTGTACGCCTTTCGCAGCAGCTGCTGGCACTGGGCGCAGACGTGACCCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGGCCTATTTTGACGTGCCGGATCTCGTGCGCGTGCTACTGAAGGGTGCACGGCCCCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCATGGCTCAGCCTTGCATATCGCTGCCTCCAACCTGTGCCTGGGCGCGGCCAAATGTTTGCTGGAACACGGCGCCAACCCGGCGCTTCGGAACCGAAAGGGACAGGTGCCAGCGGAGGTGGTCCCAGACCCCATGGACATGTCCCTGGACAAGGCAGAGGCGGCGCTGGTGGCCAAGGAGCTGCGGACGCTACTGGAGGAGGCTGTGCCGCTCTCCTGCACCCTCCCCAAGGTCACGCTACCCAACTATGACAACGTCCCAGGCAATCTCATGCTCAGTGCACTGGGCCTGCGCCTGGGAGACCGCGTGCTACTGGATGGCCAGAAGACGGGCACGCTGCGGTTCTGCGGGACCACGGAGTTCGCCAGCGGCCAGTGGGTGGGCGTGGAACTGGATGAACCTGAGGGCAAGAATGATGGCAGTGTTGGGGGTGTCCGGTACTTCATCTGCCCTCCCAAGCAGGGTCAGTCCCACTGGGGCCCAGAAGGATGGTGGTGGGGTCCACTCAGTAGTTCTGATGCTGCTGCTGAGTGCTGGGGTTGGGAGGTGATGGGGGGGGGTCAGAGGGCAGAGGCTTGGACAACTCCCAGCCCAGGCTCTGTTCCCCCAGGTCTCTTTGCCTCTGTGTCCAAGATCTCCAAGGCAGTGGACGCACCTCCCTCATCCGTCACCTCCACACCTCGGACTCCCCGGATGGACTTCTCCCGTGTCACTGGCAAAGGCCGCAGGGAACACAAAGGTAAGAAGAAGCCCCCATCATCCCCGTCTCTGGGCAGCCTGCAGCAGCGTGAAGGAGCTAAGGCTGAGGTTGGAGACCAAGTCCTCGTCGCAGGCCAGAAGCAAGGGATCGTGCGTTTCTATGGGAAGACAGACTTTGCCCCAGGTTACTGGTACGGCATAGAGCTAGACCAGCCCACCGGCAAGCATGATGGCTCTGTCTTTGGTGTCCGGTACTTCACCTGCCCTCCACGGCATGGAGTCTTTGCACCAGCATCTCGAATTCAGAGGATTGGTGGATCCACTGACCCCCCTGGGGATAATGTTGGAGCCAAAAAAGTACATCAAGTGACAAGAATGACCGGGTACACGGACTTGATGTCAATGGAGGATCAGGACGCCAGGGTTCCAGCTCTGGAACCATTCAGGGTGGAGCAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTGCAAGGAAGAGGAGGAGTATTTGCTTCGACAGGTCTTCAATGCCCCAAAACCAAAGTGGACCCAGCTCTCCGGGAGGAAGTTACAGAACTGGGGTGGGCTCCCCCATCCCCGGGGGATGGTTCCTGAGCGGCTGCCACCGTGGCTCCAGCGTTACGTGGACAAAGTGTCTGACCTCAGCCTTTTTGGGGGTCTCCCAGCCAACCATGTCCTTGTGAACCAGTATCTGCCTGGGGAGGGCATCATGCCCCACGAGGATGGGCCACTGTACTACCCGACTGTCAGCACCATCAGCTTGGGCTCCCACACCATGCTGGACTTCTACGAGCCTCGGCAGCCAGAGGATGATGACCCGACAGAGCAGCCCCGGCCCCCGCCCCGGCCGGCCACCTCGCTGTTGCTTGAACCGCGCAGCCTGCTGGTGCTCCGTGGCACCGCCTACACGCGCCTCCTCCACGGCATCGCAGCCGCCAGCGTAGACGCGCTGGACGCCGCCTCACTGCCGCGCAACGCAGCCGCCTGCCCCTCGGCGCAGGCTGGAGCCCGCCTGGTCCGCGGCACCCGCGTCTCGCTGACCATCCGCCGCGTACCCCGCGTGCTGCGCGCTGGCCTCCTGCTCAGCAAGTGA

Related Sequences

bmy_05916T0 SequenceType object (3)

Length: 803 aa      View alignments
>bmy_05916T0
MTKTDPAPMAPPLRAEGEEEEEEDEPVPEPPSPTQERRQKPVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNEILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASNLCLGAAKCLLEHGANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCTLPKVTLPNYDNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGQSHWGPEGWWWGPLSSSDAAAECWGWEVMGGGQRAEAWTTPSPGSVPPGLFASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKPPSSPSLGSLQQREGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIGGSTDPPGDNVGAKKVHQVTRMTGYTDLMSMEDQDARVPALEPFRVEQAPPVIYYVPDFICKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSDLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTMLDFYEPRQPEDDDPTEQPRPPPRPATSLLLEPRSLLVLRGTAYTRLLHGIAAASVDALDAASLPRNAAACPSAQAGARLVRGTRVSLTIRRVPRVLRAGLLLSK*