Sequence details bmy_05953 (Coding sequence)

Part of scaffold_219 (Scaffold)

For more information consult the page for scaffold_219 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBPL1 ENSTTRG00000009662 (Bottlenosed dolphin)

Gene Details

TBP-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009134, Bottlenosed dolphin)

Protein Percentage 88.17%
cDNA percentage 87.99%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0241)

TBPL1  (Minke Whale)

Gene Details

TBP-like 1

External Links

Gene match (Identifier: BACU014320, Minke Whale)

Protein Percentage 95.08%
cDNA percentage 95.36%
Ka/Ks Ratio 0.3873 (Ka = 0.0371, Ks = 0.0959)

Additional orthologs identified in other species via the OPTIC pipeline.

TBPL1 (Cow)   TBPL1 (Human)   Tbpl1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 561 bp    Location:403248..395827   Strand:-
Raw sequence 
>bmy_05953
ATGGATGCAGACAGTGATGTTGCACTGGACATTCTAATTACAAATGTAGTCTGTGTTTTTAGAACAAGATGCCATTTGAACTTAAGGAAGATTGCTTTGGAGGGAGCAAATGTAATTTATAAGCGTGACGTTGGAAAAGTATTAATGAAGCTTAGAAAGCCTAGAATTACAGCTACGATTTGGTCCTCAGGAAAAATTATTTGCACTGGAGCAACAAGTGAAGAAGAAGCTAAATTTGGTGCCAGACGTTTAGCCCGCAGTCTCCAGAAACTAGGATTTCAGGTAATATTTACAGATTTTAAGGTTGTTAACGTTTTGGCAGTATGTAACATGCCATTTGAAATACGTTTGCCAGAATTCACAAAGAACAATAGACCTCATGCCAGTTACGAACCTGAACTTCATCCTGCTGTGTGTTATCGGATAAAATCTCTAAGAGCTACATTACAGATTTTTTCAACAGGAAGTATCACAGTAACAGGGCCCAATGTAAAGGCCGTCGCTACTGCTGTGGAACAGGTATACCCATTTGTGTTTGAAAGCAGGAAAGAAATTTTATAA

Related Sequences

bmy_05953T0 Protein

Length: 187 aa      
>bmy_05953T0
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQVYPFVFESRKEIL*