Sequence detailsbmy_05961 (Coding sequence)

Part of scaffold_219 (SequenceType object (1))

For more information consult the page for scaffold_219 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC18B1ENSTTRG00000000607 (Bottlenosed dolphin)

Gene Details

solute carrier family 18, subfamily B, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000570, Bottlenosed dolphin)

Protein Percentage 93.52%
cDNA percentage 94.75%
Ka/Ks Ratio 0.59715 (Ka = 0.046, Ks = 0.0771)

C6ORF192ENSBTAG00000015242 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020271, Cow)

Protein Percentage 89.81%
cDNA percentage 90.97%
Ka/Ks Ratio 0.35748 (Ka = 0.0661, Ks = 0.1849)

SLC18B1 (Minke Whale)

Gene Details

solute carrier family 18, subfamily B, member 1

External Links

Gene match (Identifier: BACU014313, Minke Whale)

Protein Percentage 65.65%
cDNA percentage 71.43%
Ka/Ks Ratio 0.69067 (Ka = 0.3383, Ks = 0.4898)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC18B1 (Human)   Slc18b1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1536 bp    Location:1448083..1477905   Strand:+
Raw sequence 
>bmy_05961
ATGGACTCGCCGGGGGACCCCGAAGGCCCACGCCCCCCAGGAGGTTACAGAGAGCAGCGAGGCCGGATGTACCTCTGGGGCTTGGGTCGTGTCTCTTTAACAGCGATTGAATTAGCTTTAGCGGGGTTTGTTTGCGAGAGATTCGAAAAGGAGGGGCCTGACAGTGGGGTTCGGCATGTTTGCCTTCAAGGTGATGGCCCTCCAGGAGGTGCAAGGGAGACATCCAGGCGGCTTTCAAGAGAACAGATTTTTGTACTGATATCAGCAGCTTCCATTAACTTAGGTTCCATGATGTGCTATTCTATCCTTGGACCTTTTTTCCCCAAGGAGGCTGAAAAGAAAGGAGCCAGCAATACAGTTATTGGTATGATCTTTGGATGTTATGCTTTGTTTGACTTGCTGGCATCTTTGGTATTTGGAAAATATCTTGTACATATTGGAGCAAAATTTATGTTTGTAGCAGGAATGTTTGTCTCAGGAGGAGTTACAGTTCTCTTTGGTGTATTGGACCAAGTTCCAGAAGGACCCGTGTTTATTGCTATGTGTTTTCTAGTGAGAATAACTGACGCAATCAGTTTTGCTGCAGCAATAACCGCATCTTCTTCTATCCTTGCAAAGGCTTTTCCAAATAACGTGGCTACAGTAATGGGAAGTCTTGAGAGTTTTTCTGGACTGGGTCTGGTACTAGGGCCTCCTTTGGGTGGCTTCTTGTATCAGTCCTTTGGCTACGAGGTGCCTTTCATTCTTCTGGGATGCATAGTTCTGCTGATGGTTCCCCTCAACATGTGTATTTTACCTAATTATGAGTCTGATCCAGGGAAACACTCATTCTGGAAACTCATCATTTTACCCAAGGTTGCCTTTATATCCTTCGTCATTACCTCACTCAGCTCAGGTTTTGGCTTCCTTGATCCTACGCTGTCGCTCTTTGTTTTGGAGAAGTTTAATTTACCAGCTGGGTATGTGGGACTGGTATTCCTGGGTTTGGCACTATCCTACGCCATTTCTTCACCACTGGTGGGTCTACTCAGTGATAAAATGCCACATCTAAGGAAATGGCTTCTCGTTTTTGGAAACTTAATCACAGCAGGGTGCTACATGCTCTTAGGACCTGCCCCATTCTTGCACATTAAGAGTCAGCTCTGGTTGTTGGTGCTGATATTAGTCATAAATGGTATCTCTGCTGGAATGAGTTTAATTCCAACTTTCCCGGAGATTCTCAGTTGCGCACATGCTTTTCTAGGACCAACGCTGGGGGGATTTCTGTATGAGAAAATTGGTTTTGAATGGGCAGCTGCTCTACAGGGTCTCTGGGCTCTGACAAGTGGACTAGTGATGGGCTTGTTTTATCTATTGGAGCATTCAAGGAGAAGAAGGAGTCCCTTCGCCCTGAGAACTCCAGAGGCTGGTCCCTTGCCTGCCAAGCACAAGTGGCCTGTCACCCGCTTACCGGARCGGTACCAGGACGAGTGTGACCCCAGCCCCCTGCACTCGTGTGCCCTGCGGAAAGGGCCAGGCCTCGATCTCCCGGGTTAA

Related Sequences

bmy_05961T0 SequenceType object (3)

Length: 512 aa      View alignments
>bmy_05961T0
MDSPGDPEGPRPPGGYREQRGRMYLWGLGRVSLTAIELALAGFVCERFEKEGPDSGVRHVCLQGDGPPGGARETSRRLSREQIFVLISAASINLGSMMCYSILGPFFPKEAEKKGASNTVIGMIFGCYALFDLLASLVFGKYLVHIGAKFMFVAGMFVSGGVTVLFGVLDQVPEGPVFIAMCFLVRITDAISFAAAITASSSILAKAFPNNVATVMGSLESFSGLGLVLGPPLGGFLYQSFGYEVPFILLGCIVLLMVPLNMCILPNYESDPGKHSFWKLIILPKVAFISFVITSLSSGFGFLDPTLSLFVLEKFNLPAGYVGLVFLGLALSYAISSPLVGLLSDKMPHLRKWLLVFGNLITAGCYMLLGPAPFLHIKSQLWLLVLILVINGISAGMSLIPTFPEILSCAHAFLGPTLGGFLYEKIGFEWAAALQGLWALTSGLVMGLFYLLEHSRRRRSPFALRTPEAGPLPAKHKWPVTRLPERYQDECDPSPLHSCALRKGPGLDLPG*