Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATRIP ENSTTRG00000017325 (Bottlenosed dolphin)

Gene Details

ATR interacting protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016420, Bottlenosed dolphin)

Protein Percentage 97.52%
cDNA percentage 98.31%
Ka/Ks Ratio 0.50765 (Ka = 0.013, Ks = 0.0256)

ATRIP ENSBTAG00000008399 (Cow)

Gene Details

ATR-interacting protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048150, Cow)

Protein Percentage 88.86%
cDNA percentage 90.91%
Ka/Ks Ratio 0.30227 (Ka = 0.0601, Ks = 0.1987)

ATRIP  (Minke Whale)

Gene Details

ATR interacting protein

External Links

Gene match (Identifier: BACU002420, Minke Whale)

Protein Percentage 90.85%
cDNA percentage 92.39%
Ka/Ks Ratio 0.89418 (Ka = 0.0755, Ks = 0.0844)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2304 bp    Location:132246..149053   Strand:+
>bmy_05974
ATGGCTGGAATCCCCGCGCCAGGCAGCAGGAGGCGGAGCGGGCCCCCGGCACCCAGTCGTGGCCCGCCGCCCAGCACCCAGCACCCTCCGAGCAAGCGGGCCCGGGGCTTCCTCGCGGCCGGCCCCCCAGACCCAGAAGACCCATTCGGCGCACACGGGGATTTCACCGCCGACGACCTGGAGGAGCTCGACACCCTCGCGTCACAGGCCCTGAGCCAGTGCCCGAACGCGGCTCCGGACGTCTCCAATGTTCATAAGGTCCCCAGATCAGATGGGATGTCAAAAAATCCTGCAAGGAAAAAGAGAGAAAGTGTTCCAGTTAAAGATAATTTTGAATTAGAGTTACTTCAGGCACAGTACAAAGAGCTTAAAGAAAAGATGAAGGCAATGGAAGAAGAAGCGCTCATTAAAAATGGAGAAATTAAAATTTTACGGGACTCACTGCATCAGACAGAATCCATTCTAGAGGAACAGAGAAGATCACATTTCCTTCTTGAGCAAGAGAAAACTCAAGCACTCAGTGACAAAGAAAAAGAATTCTCCAAAAAGCTCCAGTCATTGCAGTCTGAACTCCAGTTTAAAGATGCAGAGATGAATGAATTGAGGACAAAGCTTCAAAGCAGTGAACGAGCTAATAAACTAGCTGCTCCCTCCATTTCCCATGTCAGTCCTAGGAAAAGCCCTTCTGTGGTTATAAAGCCAGAAGCATGTTCTCCACAACTTGGAAAACCATCTTTCCCTACAAAGGAGTCTTTTAAGAATAAGACCCACAGTCTGGGAGATGACCCGATAAAGCAAGAACAGTCCCAGAAAAGTCCTGTTGACAGCTGGATGCAGAGATCAAACACTCAAGGCTCCATTTTGATAAACCTTCTCCTGAAGCAACCTTTGATCCCAGGGTCATCCCTAGGTCTGTGCCACCTCCTGAGCAGTTGTTCTGAGGCTCCTACCGGCACCCTGTTCCAGCTACCTGGGCTTGGCAGTACCTTGACTGGGATTTCAAGCCTGAGGACCACAGGTTCTTGTGATGGGTCATTTCCCCTCTTGGCCCTGAGAGAAGCACAGAACCTGGCACTTACTGGACTGAATCTGGTGGCCAGGAATGAAGGCTCCTGTGACAGAGACCCAGCAGAGGGAGGCGGAAGGGCCTTCCCACTCTGCCAGCTTCCTGGAGCTGTGCACCTCCTCCCCCTGGTACAGTTCTTTATCGGCTTACACTGCCAGGCTCTGCAGGATTTGGCAGCAACCAAGAGAAGCGGAGCGCCTGCGGACTCACCAACACATCCCTCCTGCGTGAGCTCTGGGGTAGAGGCCAGCCCTGAGGACTCACTTTGCAACCTGGAAGGCTTCTCTGTGGCTTCACTAAGCGTTCTTCAGCACCTGGTGTGCCACAGCGGAGCAGTCATTTGCCTGTTACTATCAGGAGCAGGCGCGGATTCTGCTCCTAGGGAAGGAGACCAGAGCCTGGTTGACGGACATGGTCCTGGGGATGTGACCTCAGCCCCAGCGGGGCTTGCCGGTGACCAAGGCCAGCATCCACTATTGAAGATGCTTCTTCAACTTTTGGCTTTCTCTTCTGCAGCAACAGGTCACCTTAAAGCCAGTGTCCTCAGCCAGTGCCTTAAGGTTTTGGTGAAATTAGCTGAAAATGCTTCCTTTGATTTCCTGCCCAGGTTCCAGTGCGTGTTCCGGGTGCTGCCACAGTGCCTGCGCCCAGAGACACCCCTGCCTAGTGTGCTGCTGACTACTGAGCTCCTGTCCCTCCTGGTGGACCATGAGAAGCTTGCACCTCAGCTCTGCTCCCACCCGGAAGGCTGCCTCCTGCTGTTGCTGTACATGTACATCACATCGAGGCCTGACAAAGCTGCCTCGGAGACACAGTGGCTTCAGCTGGAACAAGAGGCTGTGTGGCTCCTGGCTAAGCTTGCTGTGCAGAGCCCCTCCTCCCCAGTCACTGGTTCCAGCTGCCAGTGCAACGTGGAGGTGGTCAGAGCACTCACGGTGATGCTGCACAGACAGTGGCTGACAGTGCGGAGGGCAGGGGGGCCCCCGAGGACTGACCAGCAGAAGCGGACGGTGCGGTGTCTGCGGGATACAGTGCTGCTGCTGCACAGTCTGTCCCAAAAGGACAAGCTTTTCACTGTGCACTGCGTGGAGGTCCTGCATCAGTACGACCAGGTGATGCCAGGGGTCAGCATGCTGATTCGAGGGCTTCCTGACGTGACAGGCTGTGAAGAGGCAGCCCTGGATGATCTCTGTGCCGCRGAGGCCGATGTGGACGACCCCGAGATGGACTGTGGCTGA

Related Sequences

bmy_05974T0 Protein

Length: 768 aa      View alignments
>bmy_05974T0
MAGIPAPGSRRRSGPPAPSRGPPPSTQHPPSKRARGFLAAGPPDPEDPFGAHGDFTADDLEELDTLASQALSQCPNAAPDVSNVHKVPRSDGMSKNPARKKRESVPVKDNFELELLQAQYKELKEKMKAMEEEALIKNGEIKILRDSLHQTESILEEQRRSHFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQSSERANKLAAPSISHVSPRKSPSVVIKPEACSPQLGKPSFPTKESFKNKTHSLGDDPIKQEQSQKSPVDSWMQRSNTQGSILINLLLKQPLIPGSSLGLCHLLSSCSEAPTGTLFQLPGLGSTLTGISSLRTTGSCDGSFPLLALREAQNLALTGLNLVARNEGSCDRDPAEGGGRAFPLCQLPGAVHLLPLVQFFIGLHCQALQDLAATKRSGAPADSPTHPSCVSSGVEASPEDSLCNLEGFSVASLSVLQHLVCHSGAVICLLLSGAGADSAPREGDQSLVDGHGPGDVTSAPAGLAGDQGQHPLLKMLLQLLAFSSAATGHLKASVLSQCLKVLVKLAENASFDFLPRFQCVFRVLPQCLRPETPLPSVLLTTELLSLLVDHEKLAPQLCSHPEGCLLLLLYMYITSRPDKAASETQWLQLEQEAVWLLAKLAVQSPSSPVTGSSCQCNVEVVRALTVMLHRQWLTVRRAGGPPRTDQQKRTVRCLRDTVLLLHSLSQKDKLFTVHCVEVLHQYDQVMPGVSMLIRGLPDVTGCEEAALDDLCAAEADVDDPEMDCG*