Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TREX2 ENSTTRG00000004030 (Bottlenosed dolphin)

Gene Details

three prime repair exonuclease 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003790, Bottlenosed dolphin)

Protein Percentage 43.09%
cDNA percentage 56.23%
Ka/Ks Ratio 0.03459 (Ka = 0.4844, Ks = 14.0067)

TREX1 ENSBTAG00000008406 (Cow)

Gene Details

three prime repair exonuclease 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011063, Cow)

Protein Percentage 83.76%
cDNA percentage 86.09%
Ka/Ks Ratio 0.20622 (Ka = 0.0905, Ks = 0.4387)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1098 bp    Location:149612..151044   Strand:+
>bmy_05975
ATGGGTCCTGGAGCTCAGCAACAGTGCCTGCCCGTGCAGGGAAGGCCAGAGGGGTGCTCCTGCCCACCCCACTTGCCTTACCCCTTATCACTGGGCACTCACACCCACCCCCCACCCCATGCTCCTCCCCAGGCTCAGCGGCAGATACCCACCATGGGCTCGCAGGCCTTGCCCCCGGGTCCTGTGCAGACCCTCATCTTCTTGGACCTGGAGGCCACTGGCCTGCCCTTCTCCCAGCCCAAGGTCACAGAGCTATGCCTGCTGGCCATCCACAGATGGGCCCTGGAGAGACTTCCCACCCCTCAGGGGCCTCCTTCAACAGTGCCCCCACCACCCCGGGTGCTGGACAAGCTCTCCCTGTGCGTGGCTCCGGGGAAGGCCTGTAGCCCTGCAGCCAGTGAGATCACAGGCCTGAGCACAGCTGTGCTGGCTGCACACGGGCGTCAATGCTTCGATGCCAACCTGGCCAACATGCTCCAAGCCTTCCTGCAGCGCCAGCCACAGCCCTGGTGCCTCGTGGCACACAACGGTGACCGCTACGACTTCCCCCTGCTCCAGGCAGAGCTGGCTGTGCTGGGCCTTGCCAGCGCTCTGGACGGCGCCTTCTGTGTGGATAGCATTGCTGCCCTGAAGGCCCTGGAGCAAGCTGGCAGCCCCTCAGAGCATGGCCCAAGGAAGAGCTACAGCCTGGGCAGCATCTACATGCGCCTGTACGGGCAGGCCCCACCAGACTCACACACAGCCGAGGGTGACGTCCTAGCCCTGCTCAGCATCTGTCAGTGGAGGCCACAGGCCCTGCTGCGGTGGGTAGATGCTCACGCCAGGCCCTTCAGCACCGTCAAGCCGATGTATGTGGTCACAGCCTCAACTGGAACCAGCCCAAGGCCATCTGCTGCTACGGCCACTGTACCCCTGGCCAGAACCAGGGACACCAGCCCCAACCGTGGTGGAAACAGGAACCCTAAGCCCCTTTCCCCAGTGAAGAGCCCTGGAGCCCCACCCAGGGAGGGACTGCTGGCCCCACTGGGCCTGCTGGCCTTCCTGACCTTGGCAGTAGCCACGTTGTATAGGCTGTCCTTGGCCATACCCGGGCAGTAG

Related Sequences

bmy_05975T0 Protein

Length: 366 aa      View alignments
>bmy_05975T0
MGPGAQQQCLPVQGRPEGCSCPPHLPYPLSLGTHTHPPPHAPPQAQRQIPTMGSQALPPGPVQTLIFLDLEATGLPFSQPKVTELCLLAIHRWALERLPTPQGPPSTVPPPPRVLDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDANLANMLQAFLQRQPQPWCLVAHNGDRYDFPLLQAELAVLGLASALDGAFCVDSIAALKALEQAGSPSEHGPRKSYSLGSIYMRLYGQAPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFSTVKPMYVVTASTGTSPRPSAATATVPLARTRDTSPNRGGNRNPKPLSPVKSPGAPPREGLLAPLGLLAFLTLAVATLYRLSLAIPGQ*