Part of scaffold_216 (SequenceType object (1))

For more information consult the page for scaffold_216 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHISA5ENSBTAG00000009183 (Cow)

Gene Details

protein shisa-5 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012101, Cow)

Protein Percentage 72.22%
cDNA percentage 80.4%
Ka/Ks Ratio 0.41176 (Ka = 0.1841, Ks = 0.4471)

SHISA5 (Minke Whale)

Gene Details

shisa family member 5

External Links

Gene match (Identifier: BACU020567, Minke Whale)

Protein Percentage 97.69%
cDNA percentage 98.15%
Ka/Ks Ratio 0.26003 (Ka = 0.0109, Ks = 0.0419)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 720 bp    Location:171432..151280   Strand:-
>bmy_05976
ATGGCCGCGCCGGCCCCAGCGCCTCGGTTCCTGCTGCTGTTGCTGTTGCTGCTACCAGCGCCTCCGGGTGCCCACAGTGAGGTGTGTATGGTTTCCCCTGGACGCAACCTCTTCCCCAAGTTCTGTCCTGATTTCTGCTGTGGCACCTGTCATGACCAGTACTGCTGCTCTGATGTGCTGAAGAAATTTGTGTGGAATGGGGAAGAGTGTGGTGTTCCGGAGGCCAGCGTCCCCGCCAATGTGGAGCCACCGGAACAGCTGGGCTCGACACTGAAGTTCCGCTCTAGCCTGGACAGCGACCCCATGTCCGGGTTTGGAACGACTGTGGCCGTCGGACTGACCATCTTTGTGCTCTCCGTCGTCACCATCATCATCTGCTTCACCTGCTCCTGCTGCTATTTGTACAAGATGTGCCGCCGACCGCGTCCGGTTGTGACTACCACCACGGCCACCACAGTAGTGCACACCCCTTACTCGCAAGCTCCAAATGTGCCGCCCAGCTACCCCGGACCAACGTACCAGGGCTACCACTCCATGCCCCCCCAGCCAGGGATGCCAGCAGCGCCCTACCCCATGCAGTACCCACCACCCTACCCGGCCCAGCCCATGGGCCCCCCGGCCTACCATGAGACAGTGGCTGGAGGTGCAGCCATGCCCTATCCTGCCAGCCAGCCTCCTTACAATCCAGCCTACATGGACCCCCCGAAGGCAGCCCCCTGA

Related Sequences

bmy_05976T0 SequenceType object (3)

Length: 240 aa      View alignments
>bmy_05976T0
MAAPAPAPRFLLLLLLLLPAPPGAHSEVCMVSPGRNLFPKFCPDFCCGTCHDQYCCSDVLKKFVWNGEECGVPEASVPANVEPPEQLGSTLKFRSSLDSDPMSGFGTTVAVGLTIFVLSVVTIIICFTCSCCYLYKMCRRPRPVVTTTTATTVVHTPYSQAPNVPPSYPGPTYQGYHSMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETVAGGAAMPYPASQPPYNPAYMDPPKAAP*