Sequence detailsbmy_05980 (Coding sequence)

Part of scaffold_216 (SequenceType object (1))

For more information consult the page for scaffold_216 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UQCRC1ENSTTRG00000017336 (Bottlenosed dolphin)

Gene Details

ubiquinol-cytochrome c reductase core protein I

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016428, Bottlenosed dolphin)

Protein Percentage 94.79%
cDNA percentage 95.21%
Ka/Ks Ratio 0.36286 (Ka = 0.036, Ks = 0.0991)

BT.23164ENSBTAG00000019096 (Cow)

Gene Details

cytochrome b-c1 complex subunit 1, mitochondrial precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025422, Cow)

Protein Percentage 90.0%
cDNA percentage 89.65%
Ka/Ks Ratio 0.1518 (Ka = 0.0553, Ks = 0.364)

Additional orthologs identified in other species via the OPTIC pipeline.

UQCRC1 (Human)   Uqcrc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1488 bp    Location:269456..260495   Strand:-
Raw sequence 
>bmy_05980
ATGCGCGGCGCGGCTCAGCGGCCACTGGAGCCAGAAGATGGCGGCTTCCGCGGTTTGCCGGGCGGCCAGCGCCGGGACGCGAGTGCTGGTGCGCAGCCGCCGCTTGGTGAGCAGCCGGCCCTGCTGAGGTCGCCTGTCTTGCGGGGCATCGCCACCTACGCCCAGGCCCTGCAGAGCGTGCCGGAGACGCAGGTCAGCCAGCTGGACAACGGGCTGCGAGTGGCCTCGGAGCAGTCCTCCCAGCCTACCTGCACGGTGGGGGTGTGGATTGATGCTGGCAGCCGTTATGAGACTGAGAAGAACAACGGGGCAGGCTACTTTGTGGAGCATCTGGCTTTCAAGGGAACAAAGAATCGGCCTGGCAGTGCCTTGGAGAAGGAGGTGGAGAGCATGGGGGCCCATCTTAATGCCTACAGCACCCGGGAGCACACAGCTTACTACATCAAGGCACTGTCTAAGGACCTGCCAAAAGCTGTGGAGCTCCTGGCCGACATTGTGCAGAACTGCAGCCTAGAAGACTCCCAGGTTGAGAAGGAGCGTGATGTGATCCTGCAGGAGCTGCAGGAGAACGATGCATCTATGCGGGACGTGGTCTTTGACTACCTGCATGCCACGGCATTCCAGGGCACACCTCTAGCCCAGGCCGTGGAGGGGTCCAGTGAGAATGTCAGGAAGCTGTCTCGGGCAGACCTGACTGAGTACCTCAGCCGGCATTACAAGGCCTCTCGAATGGTTTTAGCAGCAGCTGGAGGGGTGGAGCACCGGCAGCTGCTAGACCTCGCCCAGAAGCACTTCTGCAGCCTCTCTGGGACATACGCTGAAGACGCTGTGCCCACTCTCACTCCCTGCCGCTTTACTGGCAGCGAGATCCGCCACCGTGATGATGCCCTGCCTTTGGCCCATGTGGCCATTGCAGTGGAGGGGCCTGGCTGGGCCAACCCGGACAATGTGGCCCTCCAGGTGGCCAATGCCATCATTGGCCACTATGACTGCACTTACGGTGGTGGCACGCACCTGTCCAGCCCACTGGCTGCAGTTGCTGCAACCAAGAAGCTGTGCCAGAGTTTCCAGACCTTCAACATCTGCTACGCAGAGACAGGGTTACTGGGCGCACACTTTGTCTGCGACCACATGAGCATCGACGACATGATGTTCTTCCTACAGGGCCAGTGGATGCGCCTTTGCACCAGTGCCACAGAGAGCGAGGTGGTCCGGGGCAAAAACATTCTCAGAAATGCTCTGGTGTCTCATCTGGATGGCACCACTCCTGTATGTGAGGACATTGGACGTAGTCTTCTGACGTATGGCCGCCGCATCCCCCTGGCTGAGTGGGAAAGCCGGATTGCGGAGGTGGATGCCAGTATCGTGCGTGAGGTCTGCTCCAAGTACTTCTATGACCAGTGTCCAGCAGTGGCTGGATTGGGCCCCATTGAACAGCTTCCAGATTATAACCGGATCCGTAGCGGCATGTTCTGGCTGCGCTTCTAG

Related Sequences

bmy_05980T0 SequenceType object (3)

Length: 496 aa      View alignments
>bmy_05980T0
MRGAAQRPLEPEDGGFRGLPGGQRRDASAGAQPPLGEQPALLRSPVLRGIATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYETEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQVEKERDVILQELQENDASMRDVVFDYLHATAFQGTPLAQAVEGSSENVRKLSRADLTEYLSRHYKASRMVLAAAGGVEHRQLLDLAQKHFCSLSGTYAEDAVPTLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVALQVANAIIGHYDCTYGGGTHLSSPLAAVAATKKLCQSFQTFNICYAETGLLGAHFVCDHMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASIVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF*