Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC25A20 ENSTTRG00000017343 (Bottlenosed dolphin)

Gene Details

solute carrier family 25 (carnitine/acylcarnitine translocase), member 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016435, Bottlenosed dolphin)

Protein Percentage 85.71%
cDNA percentage 86.05%
Ka/Ks Ratio 0.25016 (Ka = 0.0056, Ks = 0.0223)

SLC25A20 ENSBTAG00000000191 (Cow)

Gene Details

mitochondrial carnitine/acylcarnitine carrier protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000217, Cow)

Protein Percentage 96.01%
cDNA percentage 94.02%
Ka/Ks Ratio 0.08973 (Ka = 0.0185, Ks = 0.2067)

SLC25A20  (Minke Whale)

Gene Details

solute carrier family 25 (carnitine/acylcarnitine translocase), member 20

External Links

Gene match (Identifier: BACU002414, Minke Whale)

Protein Percentage 99.67%
cDNA percentage 99.22%
Ka/Ks Ratio 0.06677 (Ka = 0.0016, Ks = 0.0237)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 912 bp    Location:503284..472726   Strand:-
>bmy_05987
ATGGCAGACCAGGCGAAGCCCATTAGCCCGCTCAAGAACCTGCTGGCCGGCGGCTTTGGAGGCATGTGCCTGGTGTTCGTGGGGCACCCGCTGGACACGGTCAAGGTCCGACTGCAGACGCAGCCCCCAAGTTTGCCTGGACAGCCTCCCATGTATTCTGGGACCTTTGACTGTTTCCGGAAGACTCTTATGAGAGAGGGCATCACGGGTCTATATCGGGGCATGGCCGCCCCCATCATTGGGGTCACCCCCATGTTTGCCGTGTGCTTCTTTGGGTTTGGTTTGGGGAAGAAACTGCAACAAAAACACCCAGAGGATGTGCTCAGCTACCCCCAACTATTTGCAGCTGGGATGTTATCTGGTGTATTCACCACGGGAATTATGACCCCTGGAGAACGGATCAAGTGCTTGTTACAGGTGAGGATTCAAGCTTCTTCAGGGGAGACCAAATACACTGGTGCCTTGGACTGTGCAAAGAAGCTATACAAGGAGGCTGGGATCCGAGGCATCTACAAGGGGACTGTGCTCACCCTCATGCGAGATGTTCCAGCCAGTGGGATGTATTTCATGACATATGAATGGCTGAAAAATATCTTCACTCCAGAGGAAAAGAGTGTCAATGAGCTCAGCGTGCCTCGGATTCTGGTGGCTGGGGGCATCGCAGGGATCTTCAACTGGGCTGTGGCAATCCCTCCAGACGTGCTCAAGTCCCGCTTCCAGACTGCACCTCCTGGGAAATATCCTAATGGCTTCAGAGATGTGCTGAGGGAGCTGATCCGGAATGAAGGAATCACATCCTTGTATAAGGGGTTCAATGCAGTGATGATCCGAGCCTTCCCAGCCAATGCAGCCTGTTTCCTTGGCTTTGAAGTTGCCATGAAGTTCCTTAATTGGGCCATGCCCAACTTGTGA

Related Sequences

bmy_05987T0 Protein

Length: 304 aa      View alignments
>bmy_05987T0
MADQAKPISPLKNLLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQVRIQASSGETKYTGALDCAKKLYKEAGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEEKSVNELSVPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRNEGITSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWAMPNL*