Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF123 ENSTTRG00000002749 (Bottlenosed dolphin)

Gene Details

ring finger protein 123

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002578, Bottlenosed dolphin)

Protein Percentage 97.14%
cDNA percentage 97.33%
Ka/Ks Ratio 0.27018 (Ka = 0.0177, Ks = 0.0656)

RNF123 ENSBTAG00000011588 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF123

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042771, Cow)

Protein Percentage 92.88%
cDNA percentage 91.15%
Ka/Ks Ratio 0.10856 (Ka = 0.0396, Ks = 0.3648)

RNF123  (Minke Whale)

Gene Details

ring finger protein 123

External Links

Gene match (Identifier: BACU002393, Minke Whale)

Protein Percentage 98.97%
cDNA percentage 99.31%
Ka/Ks Ratio 0.29105 (Ka = 0.0046, Ks = 0.0156)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4506 bp    Location:1121577..1151453   Strand:+
>bmy_06014
ATGGCTGGGCCAGGAGCTCCTCCTGCGCAGGCGGGGGTCGGAGGCGGTTGGGCAGTGGGGCAGTGGGGCGAGGCGGGGGACGGGAACGTCCCGGCTGGAGGCCGCGGAGGAAGCCCCCCCCCCCCCCGCTGGAGGCTGTGGAGGGGCCCCCTGGCGGAGGTCGGGCGCGGGTCGATGCGCGTGCGCGGCGGCCGCGCGGTTTGGCCCTGGACAGGAGCCGTAGCTGAGAGCTGGGCGGATGTTGTGAGCCGGGGCGCGGTGGCCGAGGCTGGGGGCATCGTGCACGAGAAGCTACTGGACGACTACCTGCACCGCATCTTTTCCTCTACTGATCGTGCACCCACGGCAGCCACCAGCAGGAAACTCCTGAACTTCCAGAACCTGCCAGAGCATCTGGACCAGTTGTTACATGTGGACGAGGAGGCGGAGGAGGAGGAGGAGAGCCAGGGACAGGTTGAAGGGCGGCTTGGCCCATCCACTGTGGTCCTGGACCACACGGGTGGCTTCGAAGGGCTTCTTCTGGTGGATGATGACCTCTTGGGGGTGATTGGACACAGCAACTTTGGTACTATCCGCTCTACCACATGCGTGTACAAAGGGAAATGGGTCTACGAGGTGCTCATCTCCTCCCAGGGGCTCATGCAGATTGGCTGGTGCACGATCAACTGCCGCTTCAATCAGGAGGAGGGGGTTGGAGATACACACAACTCCTATGCCTACGACGGCAACCGGGTGCGCAAGTGGAACGTGACCACGACGAACTACGGGAAGGCGTGGGCAGCGGGGGACATTGTGAGCTGCCTGATCGACCTGGACGAAGGCACGCTGTCCTTCTGCCTGAATGGTGTGTCGCTGGGCACCGCCTTTGAGAACTTATCCAGGGGCTTGGGCATGGCCTACTTCCCAGCCATCAGCCTCTCCTTCAAGGAGTCTGTGGCCTTCAACTTTGGCAGCCTGGTGGGCTACCGGCCCCTGCAGGACCCACCAAGCGCCGACCTGGTTCGGGCACAGGAGCTGCTGGGCTGCTTCCAGGCAGTGCTGAGCGTGGAGCTGGACCCCGTGGAAGGGCGGCTGGTGGAGAAGGAAAGCTCTGAGTGGCAGTTGCAGGGCCAGCCCACCGTCCTCCTCACACTGGCTCACATCTTCCATCGCTTCGCACCGCTCCTGCGCAAGGTGTACCTGGTGGAGGCCGTGCTCATGAGCTTCCTGCTGGGCATCGTGGAGGCGGGCACCCCCACACAGGCGCAGTCTGTGGTGCACCAGGTCCTGGATCTCCTGTGGCTCTTCATGGAGGACTATGAGGTGCAAGATTGCCTCAAGCAGTTGATGATGTCCCTGTTGCGGCTGTACCGGTTCTCACCCATCGTCCCTGACCTGGGCCTGCAGATCCGCTACCTGCGGCTCACCATTGCCATCCTCAGTCATGAGAAGTCCCGCAAGTTTCTGCTTAGCCACGTCCTCTTCGACGTGCTCCGGTCCGTTGTCTTCTTTTACATCAAGAGCCCCCTGCGTGTGGAGGAGGCTGGCCTACAGGAGCTCATCCCCACCACCTGGTGGCCCCACCGCTCCAGCAGGGAGGGCAAAGAGAGTAAGGAGGTGAAGGACGAAACCTCCGAGGAGCGGCTCCGGCGGCGTGCCTATGAACGGGGCTGCCAAAGGCTCAAGAAGCGCATCGAAGTGGTGGAGGAACTACAGGTCCAGATCCTGAAGCTGCTGTTGAACAATCAAGATGACAACGGGGTAAGTGACTCCCAGACCCCTGTGTGGGTCCCTGGCCAGGAAGGGTGTCAGACCGGGCCTGGAGACCCAGAGGGCAGGGCTGGCTCAGGCTCTTGTGGCAGGGTACAGGCTAAGTTGAGTCCGGTCCGGGGCCAGGATCCTCAGCTCATCACAGCCTCGGCTTTCCTTCCCCTGAAGGGCGAAGCGTCTAGGTACATCTTCCTGACCAAGTTCCGAAAGTTTCTGCAGGAGAATGCCAGCGGCCGGGGGGTAGGTATCCCCAGGCCAGCCCACCATGGCCCCCTGGCTTTGTTGCAGCATTTGCACCTGAAATTCTGGCACCTCTGCATCTCCTCCCCACCTGCCGCCCTACCCTCTCTGCTCATCCCAGGGTCCTGGGGCAGGGCCTTGAATGAGGAGTGGGCTGGCCTCCGGGCTGCACAAATGCATGTCTTACACCTGTGCCTGCAGAACATGCCCATGCTCTGCCCCCCCGAGTACATGGTCTGCTTCTTACACCGCTTGATCTCGGCCCTGCGTTACTACTGGGACGAATACAAGGCCTCGAACCCATGCACTACCTTCAGTGAGGAGGCCTACATCCCGCCCCAGGTCTTCTATAATGGCAAGGTGGACTACTTCGACCTGCAGCGCCTTGGAGGCCTCCTCTCGCACCTTCGGAAGACCCTCAAAGATGACCTTGCCTCCAAGGCCAACATCTTGATCGACCCACTGGAGCTCCAGGCGGCCACCATGGATGACCTGGATGAGGATGAGGAGCCAGCCCCGGCTGCGGCCCAGCGCCCCATGCAGGCCCTGGCCATGGGGGGCGCGCTGCCCCTGCCTCGGCCCAGCTGGCTCAGTTCTCCAACCCTGGGCCGAGCCAACCGCTTCCTCAGCACAGCAGCTGTGAGCCTGATGACCCCACGGCGGCCTCTGAGCACCTCAGAGAAAGTGAAGGTCCGCACGCTGAGCGTGGAGCAGAGGACCCGTGAGGACATTGAGGGTAGCCAGTGGAATGAGGGCCTGCTGGTGGGGCGGCCCCCCGAGGAGCCTGAGCAGCCCCTCACCGAGAACTCCCTGCTGGAAGTCCTGGATGGTGCCATCATGATGTATAATCTCAGCGTTCACCAGCAGCTGGGCAAGATGGTGGGAGTGTCCGATGATGTCAATGAGTATGCGATGGCTCTGAGGGACACAGAGGACAAGCTCCGCCGGTGCCCCACGCGGAGGAAGGATATCCTTGCAGAGTTGACGAAGAGCCAGAAGGTTTTCTCAGAAAAGCTGGATCACCTAAGTCGCCGTCTTGCCTGGGTCCATGCCACCGTCTACTCCCAGGAGAAGATGCAGGACATCTACTGGCTGCTGCGTGTCTGCCTGCGGACCATCGAGCATGGAGACCGCACAGGTCCTCTCTTTGCCTTCATGCCCGAATTCTACCTGAGTGTGGCCATCAACAGCTACAGTGCTCTCAAGAATTACTTTGGCCCTGTGCACAGCATGGAGGAGCTCCCAGGCTATGAAGAGACCCTGACCCGTCTGGCTGCCATCCTTGCCAAACACTTTGCCGACACACGCATCGTGGGCACTGATATCCGTGACTCGCTGATGCAGGCCCTGGCCAGCTACGTGTGCTACCCAAACTCCCTGCGGGCTGTGGAGCGGATCCCTGAGGAGCAGCGTATCGCCATGGTGAGGAGTCTCCTGGCTCCCTATGAGCAGCGGCCCTGGGCCCAGACCAACTGGATCCTGGTGCGGCTCTGGAGGGGCTGTGGGTTCGGGTACCGCTATACACGGCTGCCACATCTGCTGAAAACCAAACCCGAGGATGCCAATTTGCCCAGCCTCCAGAAGCCCTGCCCCTCCACCCTGCTGCAGCAGCACATGGCAGACCTGTTGCGGGAGGGTCCTGACGTGGCACCCAGCTTCCTCAACAGTGTCCTCAACCAGCTCAACTGGGCCTTTTCTGAGTTTATCGGCATGATCCAGGAGATCCAGCAGGCTGCTGAACGCCTGGAGCGGAACTTTGTGGACAGCCGGCAGCTCAAGGTATGTGCCACCTGCTTTGACCTCTCGGTCAGCCTGCTGCGCGTCTTGGAGATGACCATCACGCTGGTGCCTGAGATATTCCTCGACTGGGCCCAGCCTACCTCCGAGATGCTGCTGCGGCGTCTTGCACAGCTGCTGAACCAGGTGCTGAACCGGGTGACAGCTGAGAGGAACCTGTTTGACCGCGTGGTCACCCTGCGGCTGCCTGGCCTGGAGAGTGTGGACCACTACCCTATTCTGGTGGCAGTGACAGGCATCCTGGTACGACTCCTGGTGCACGGCCCAGCCTCAGGGACAGAGAGAGCCACATCAGTGCTCCTGGCTGATCCCTGCTTCCAGCTCCGCTCCATATGCTATCTGCTGGGGCAGCCAGAGCCCCCTACCCCTGGCACTACCCTGCCTGCCCCTGACCAGAAGCGCTTCTCCCTACAGAGCTACACAGATTACATCAGTGTTGAGGAACTGGCCCAGGTGGAACAGATGTTGGCACACCTGACCTCTGCGTCTGCCCAGGCAGCAGCTGCCTCCCTGCCCACCAGTGAGGAAGACCTCTGCCCCATCTGCTATGCTCACCCCATTTCTGCTGTGTTCCAGCCCTGTGGCCACAAGTCCTGCAAAGCCTGCATCAACCAGCACCTGATGAACAACAAGGATTGCTTCTTCTGCAAAGCCACCATTGTGTCTGTAGAGGACTGGGACAAGGCAGCCAGTGCAAGTGCCACTTCCTCGGCTGCCTAG

Related Sequences

bmy_06014T0 Protein

Length: 1502 aa      View alignments
>bmy_06014T0
MAGPGAPPAQAGVGGGWAVGQWGEAGDGNVPAGGRGGSPPPPRWRLWRGPLAEVGRGSMRVRGGRAVWPWTGAVAESWADVVSRGAVAEAGGIVHEKLLDDYLHRIFSSTDRAPTAATSRKLLNFQNLPEHLDQLLHVDEEAEEEEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDEGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKESVAFNFGSLVGYRPLQDPPSADLVRAQELLGCFQAVLSVELDPVEGRLVEKESSEWQLQGQPTVLLTLAHIFHRFAPLLRKVYLVEAVLMSFLLGIVEAGTPTQAQSVVHQVLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIRYLRLTIAILSHEKSRKFLLSHVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGKESKEVKDETSEERLRRRAYERGCQRLKKRIEVVEELQVQILKLLLNNQDDNGVSDSQTPVWVPGQEGCQTGPGDPEGRAGSGSCGRVQAKLSPVRGQDPQLITASAFLPLKGEASRYIFLTKFRKFLQENASGRGVGIPRPAHHGPLALLQHLHLKFWHLCISSPPAALPSLLIPGSWGRALNEEWAGLRAAQMHVLHLCLQNMPMLCPPEYMVCFLHRLISALRYYWDEYKASNPCTTFSEEAYIPPQVFYNGKVDYFDLQRLGGLLSHLRKTLKDDLASKANILIDPLELQAATMDDLDEDEEPAPAAAQRPMQALAMGGALPLPRPSWLSSPTLGRANRFLSTAAVSLMTPRRPLSTSEKVKVRTLSVEQRTREDIEGSQWNEGLLVGRPPEEPEQPLTENSLLEVLDGAIMMYNLSVHQQLGKMVGVSDDVNEYAMALRDTEDKLRRCPTRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMQDIYWLLRVCLRTIEHGDRTGPLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADTRIVGTDIRDSLMQALASYVCYPNSLRAVERIPEEQRIAMVRSLLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLREGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWAQPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGLESVDHYPILVAVTGILVRLLVHGPASGTERATSVLLADPCFQLRSICYLLGQPEPPTPGTTLPAPDQKRFSLQSYTDYISVEELAQVEQMLAHLTSASAQAAAASLPTSEEDLCPICYAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAASASATSSAA*