Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GMPPB ENSTTRG00000002755 (Bottlenosed dolphin)

Gene Details

GDP-mannose pyrophosphorylase B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002582, Bottlenosed dolphin)

Protein Percentage 99.7%
cDNA percentage 97.9%
Ka/Ks Ratio 0.01559 (Ka = 0.0014, Ks = 0.0877)

BT.74381 ENSBTAG00000032026 (Cow)

Gene Details

mannose-1-phosphate guanyltransferase beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015403, Cow)

Protein Percentage 98.2%
cDNA percentage 94.19%
Ka/Ks Ratio 0.02929 (Ka = 0.0081, Ks = 0.2782)

GMPPB  (Minke Whale)

Gene Details

GDP-mannose pyrophosphorylase B

External Links

Gene match (Identifier: BACU018658, Minke Whale)

Protein Percentage 99.4%
cDNA percentage 99.2%
Ka/Ks Ratio 0.11305 (Ka = 0.0028, Ks = 0.0244)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1002 bp    Location:1153056..1149941   Strand:-
>bmy_06016
ATGAAGGCACTGATTTTGGTGGGCGGCTATGGGACGCGCCTGCGGCCGCTGACACTAAGCATCCCGAAGCCGCTGGTGGACTTCTGCAATAAGCCCATCTTGCTGCACCAAGTGGAGGCGCTGGCCGCGCTAGGAATCCGAATCTCTATGTCCCATGAAGAGGAGCCTTTAGGGACAGCTGGGCCCCTGGCACTGGCCCGTGACTTGCTCTCTGAGACTGCAGACCCTTTTTTCGTCCTCAACAGTGACGTGATCTGCGATTTCCCCTTTCAAGCCATGGTGCAGTTCCACCGACACCATGGCCAGGAGGGCTCAATTCTGGTGACCAAAGTGGAGGAACCCTCTAAGTACGGTGTGGTGGTGTGTGAGGCGGACACAGGCCGCATTCACCGGTTCGTGGAGAAGCCGCAGGTGTTTGTGTCCAACAAGATCAACGCAGGCATGTACATCCTGAGCCCTGCAGTGCTACGGCGCATCCAGCTGCAGCCCACATCCATTGAGAAGGAGATCTTCCCTGTCATGGCCAAGGAGGGGCAGCTCTATGCCATGGAGTTGCAGGGCTTCTGGATGGACATTGGGCAGCCCAAGGATTTCCTCACTGGCATGTGCCTCTTCCTGCAGTCGCTGCGACAGAAGCAGCCTGAGCAACTGTGCTCAGGTCCTGGCATTGTGGGCAACGTGCTGGTGGACCCAAGTGCCCGTATTGGCGAAAACTGCAGCATTGGCCCCAACGTGAGTCTGGGTCCTGGTGTGGTGGTGGAGGATGGTGTGTGCATTCGGCGGTGCACGGTGCTGCGAGACGCCCACATTCGCTCCCACTCCTGGCTGGAGTCCTGCATTGTAGGCTGGCGCTGCCGCGTGGGCCAGTGGGTGCGCATGGAGAACGTGACAGTGCTGGGTGAGGACGTCATAGTTAACGACGAGCTCTACCTCAACGGGGCCAGTGTGCTGCCCCACAAGTCTATTGGTGAGTCGGTGCCGGAGCCCCGCATCATCATGTGA

Related Sequences

bmy_06016T0 Protein

Length: 334 aa      View alignments
>bmy_06016T0
MKALILVGGYGTRLRPLTLSIPKPLVDFCNKPILLHQVEALAALGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLRRIQLQPTSIEKEIFPVMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPEQLCSGPGIVGNVLVDPSARIGENCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM*