Sequence detailsbmy_06019 (Coding sequence)

Part of scaffold_216 (SequenceType object (1))

For more information consult the page for scaffold_216 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDHR4ENSBTAG00000005728 (Cow)

Gene Details

cadherin-related family member 4 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007530, Cow)

Protein Percentage 83.0%
cDNA percentage 87.51%
Ka/Ks Ratio 0.41681 (Ka = 0.1059, Ks = 0.254)

CDHR4 (Minke Whale)

Gene Details

cadherin-related family member 4

External Links

Gene match (Identifier: BACU002391, Minke Whale)

Protein Percentage 90.63%
cDNA percentage 92.54%
Ka/Ks Ratio 0.63729 (Ka = 0.0703, Ks = 0.1104)

Additional orthologs identified in other species via the OPTIC pipeline.

CDHR4 (Human)   Cdhr4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2412 bp    Location:1243146..1237180   Strand:-
Raw sequence 
>bmy_06019
ATGTGGCCAGGCCCTAAGGCAGAAAGGAGGGACTCTGATTGTGTATATGGTTCCATGAGAATGGGGGCCTCCAGCCTGAATCGTCTCTTCCTCACAGACCTCCACTGCCTGCCCTGGTTCATAAATGTCTCTGAGAGCCAGGGACCTGGCACCATCCTTCAGTCTTTCTCCTTCAACTGCTCTTCACACACACCCACGCTGGAGTTGCTCCATGTGCAGCCCCCCACCACCTTCTTCAACCCACCTAGCCTAACTAGATGGCAGGGGATCTATGTGGGCAAGATGACCTTGAGCAGCTCGGCCCGGCTGGATGCCCTGACAGTGAACCACTATGAGCTGCAGCTGCGGTTCACATGTGGCAACCATGTGATGGAGGGACCACTCTCTGTGGATGTGCAGCGGGACCCTGGTCGTATCCAGTGTGCTGGTCGATTTGCCAGCCCAGCTGGGGAAATCATTCAGGTGCCAGAAACTGTCACACCTGGGACCCGGCTGTACACTCTGCTGCTCCCAGGCCAGGGAGCCCAGATGAGCATCACCAGTGCCCAGGATCCGCCATACTTCCCTGGACCTTTCTCTATCAATGGGCAGGGTTGGCTGCAGGCGCCATCCCAGGGCCTCAAAGGCCAGGCTCAAAAGGTCTTCCAGCTTCAGATCCTGGTGACCTTTGGACAAGGCCGAAGCTGCTGTGGGATGCTGACAGTGAAAGTTTTGCCTGCTCCCTCCAGCCAGGTCTCCTTCCTGCAGCAAGCCCAGAATATCACCATCCCGGAGAACCTGGTCCCCGGAAGTAAGGTGGTTCAGGTCCAGGCCCGGGGCTTCAATGTGTGCTACGAAATCCTCTCCCCAGTGCCCTGCCGGCTCTTCTCCATCGGACGCGTCGACGGAGTGGTCCGGACAACCTCGCCCCTGGAGCTGGCGCAAGCCCCAGACGCCGCGGTCACTAGGCTGCGGGTGAAGGCCTTTGAGCGGCTCCGGCCGTGGGCCAGCGCCGAGCTTGATTTCAGGGTGGACGTGCAGTCGGTCAACCGCTGGCCCCCGCGCTGCACACCAGCGCTGCTGGTGACTCAAATCCCCGAGACCACGCCTGTGGGCACCGTGCTGAATACCTTCACTTGCACTGACCCGGACTCTCCTGGCTCCACCCTGGACTACCAGCTGCTGTTCCACAGCCCTGTTGGCGCAGCCAGCCTCTGCCTTCAAGACAGAGTCCTGGAGGTGCCCAGTCCCCGACCCCAGACCCATGTGCAGAGGGCTTGGACAGGAAGGGGGGTGGGCCAATGGTCTGCGGGAGCCGAGACCATGAGGGTGAAGGAGATGGTGGTGGAGTCAACCTGCTTTACAGTCTGGAAAACGGAGGGTCAGGGTAGGCTATCTACGCCAGGGCAGGGCTGGGCAACCCAGGCCAGCTCCCTGACTGCCAAATGGCTTCCAGCTGAGGTGCCAGTACTGGTGATGGTGACACCTGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTTCGTGAGGATGCAGGGCCCCACGCTCTTCTGGGCTCTGTGGTGGGCAAGGACATGGATTACCCGCACGACAGCATTGAGTACTCCACCCCTGGCGGGTCTGCCACTTTTGCTGTGGACCGTCTCAGCGGGGAGGTTCGCCTCCTGGGGCCTTTGGACTATGAGCTGCAGAAGTTGCACAGGCTCACTGTCCTGCTGACTGACCATAGCCAAGACCAGGACCCCACCTGCCACCGCTCAGGCTCTTGCACCATTACCATTGAGGTGGAGGATGTGAACGACCATGCCCCCGAGTGTGAGCCCCCATTTCAGGAGCTCACCATCCACACTCACCTGGGCCGCAGCATGGAGGTGACCAGAGTGTCATGTCGGGTGCCCCAAGAGCCACAGCGCCTGGCTTTCTCCTACAGCATTGTGGGAGGGAATAGTCGGAGCCAATTCAGCCTGCAAGGAGCTGTCCTGGTGCACAACGACCTCATGTTGGGGCCCTCCTGGCCAGAGCAGCCCCATACTTATGAGCTATTGATCCGTGTGGCCGATGCAGGTCCCTCCACCCCCCACCTCAGCACCACAGCCACTGTCATTGTGCATCTAGTTCCCTGGAGGGCCAGCACAGTGACTTCAATGATGACACCCCTGCTTGTGACAGACACGGAGGCTTTCTGGCAGCCAGAGCCCTGGTTTGTGGTGGTGCTGACAGTGACCAGTGCGCTTCTCCTCTTGGCTCTGGGCTGGCTCCTCAGCAGGCTCCTGCGGGGGTTGGCCCAGGTGCTACAGGCACCAAGCAAACCAACCCAGGCTCTACTGCTAAACAGTATCCAGGGAACTGAGGGGTCCGTTGAGGGGTTCATGGAGGCACCGAGGATGGAGACACCCCAGGCACCCAGCAGTGTCATGAGCCTG

Related Sequences

bmy_06019T0 SequenceType object (3)

Length: 804 aa      View alignments
>bmy_06019T0
MWPGPKAERRDSDCVYGSMRMGASSLNRLFLTDLHCLPWFINVSESQGPGTILQSFSFNCSSHTPTLELLHVQPPTTFFNPPSLTRWQGIYVGKMTLSSSARLDALTVNHYELQLRFTCGNHVMEGPLSVDVQRDPGRIQCAGRFASPAGEIIQVPETVTPGTRLYTLLLPGQGAQMSITSAQDPPYFPGPFSINGQGWLQAPSQGLKGQAQKVFQLQILVTFGQGRSCCGMLTVKVLPAPSSQVSFLQQAQNITIPENLVPGSKVVQVQARGFNVCYEILSPVPCRLFSIGRVDGVVRTTSPLELAQAPDAAVTRLRVKAFERLRPWASAELDFRVDVQSVNRWPPRCTPALLVTQIPETTPVGTVLNTFTCTDPDSPGSTLDYQLLFHSPVGAASLCLQDRVLEVPSPRPQTHVQRAWTGRGVGQWSAGAETMRVKEMVVESTCFTVWKTEGQGRLSTPGQGWATQASSLTAKWLPAEVPVLVMVTPVNEFSPACVPRTFRVREDAGPHALLGSVVGKDMDYPHDSIEYSTPGGSATFAVDRLSGEVRLLGPLDYELQKLHRLTVLLTDHSQDQDPTCHRSGSCTITIEVEDVNDHAPECEPPFQELTIHTHLGRSMEVTRVSCRVPQEPQRLAFSYSIVGGNSRSQFSLQGAVLVHNDLMLGPSWPEQPHTYELLIRVADAGPSTPHLSTTATVIVHLVPWRASTVTSMMTPLLVTDTEAFWQPEPWFVVVLTVTSALLLLALGWLLSRLLRGLAQVLQAPSKPTQALLLNSIQGTEGSVEGFMEAPRMETPQAPSSVMSL