Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAIP ENSTTRG00000004899 (Bottlenosed dolphin)

Gene Details

TRAF interacting protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004620, Bottlenosed dolphin)

Protein Percentage 96.84%
cDNA percentage 97.82%
Ka/Ks Ratio 0.56564 (Ka = 0.0189, Ks = 0.0334)

BT.102673 ENSBTAG00000004877 (Cow)

Gene Details

TRAF-interacting protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054002, Cow)

Protein Percentage 88.62%
cDNA percentage 91.44%
Ka/Ks Ratio 0.28331 (Ka = 0.0589, Ks = 0.2077)

TRAIP  (Minke Whale)

Gene Details

TRAF interacting protein

External Links

Gene match (Identifier: BACU002388, Minke Whale)

Protein Percentage 97.82%
cDNA percentage 98.38%
Ka/Ks Ratio 0.50337 (Ka = 0.0137, Ks = 0.0272)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:1293597..1267465   Strand:-
>bmy_06022
ATGCCTATCCGTGCTCTGTGTACCATTTGCTCTGACTTCTTCGATCACTCCCGCGACGTGGCCGCCATTCACTGCGGCCACACCTTCCACTTGCAGTGCCTAATTCAGTGGTTCGAGACAGCACCAAGTCGGACCTGCCCGCAGTGCCGAATCCAGGTTGGCAAAAGAACCATTATCAATAAGCTCTTCTTTGACCTTGCCCAGGAGGAGGAGAGTGTCTTAGATGCAGAATTCTTAAAGAATGAACTGGATAATACCAGAGCCCTGCTTTCCCAGAAAGAGAAGGAAAAACGAGACAGCCAGCTCATCATTGACACTCTGCGGGACACGCTGGAAGAACGCAACGCCACTGTTGAATCCCTGCAGAAGGCCTTAGACAAGGCTGAGATGCTGTGCTCCACCCTCAAGAAGCAGATGAAGTACTTGGAACAGCAGCAGGATGAGACCAAACAAGCACGGGAGGAGGCCCGCCGGCTCCGGAACAAGATGAAGACCATGGAGCGGATTGAGCTCCTACTCCAGAGTCAGCGGCCCGAGGTGGAGGAGATGATCCGAGACATGGGTGTGGGACAGTCAGCGGTGGAGCAGTTGGCTGTGTACTGCGTGTCCCTCAAGAAAGAGTACGAGAATCTAAAAGAGGCGCGGAAGGCCTCAGGGGAGCTAGCCGACAAACTGAAGAAGGACTTGTTTTCTTCCAGAAACAAGTTGCAGACAGTCTACTCTGAACTGGACCAGGCCAAGTTGGAGCTGAAGTCGGCCCAGAAGGACTTACAGAGTGCTGACAAGGAAATCGCAAGCCTGAGAAAAAAGCTAACGATGCTGCAGGAAACCCTGAACCTGCCACCAGTGGACAGTGAGACTGTCAACCGCCTGGTTTTAGAGAGCCCAGCTCCTGTGGAGATGCTGAACCTGAAGCTTCGCCAGCCAGCCTTCGGCGATGATATTGACCTCAATGTCACCTTTAATGTGGATACTCCCCCAGCCCAGCCCTCCAGCACCCAGCATGGCCATGCCAAGAGGCTCTTCCCAGAGAAGGCACAGCTTATCAAGCCTGGCTCTGGGGTAAGGACCGGCTTCGATGGACTTGGAGGCCGGACAAAATTCATCCAGCCTACTGACACGACTATGATCCGCCCACTGCCCGTTAAACCCAAGCCCAAGGCCAGGGCTAAGCAGAGACTGGGGGCCAGGACAGTGCTCCCTCCCTCCCAGGCCAAGCTGGACACCTTCCTGTGGCCGAGGACTGCTGACTGGCTCGGCAGATGGTTTGGGGGGCATGGCCCCTCTTCTAGGACCAGCCCTGAGGACGAGGATAAACAAGAAGATGGGGGTGAA

Related Sequences

bmy_06022T0 Protein

Length: 445 aa      View alignments
>bmy_06022T0
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDSQLIIDTLRDTLEERNATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRNKMKTMERIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSRNKLQTVYSELDQAKLELKSAQKDLQSADKEIASLRKKLTMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLRQPAFGDDIDLNVTFNVDTPPAQPSSTQHGHAKRLFPEKAQLIKPGSGVRTGFDGLGGRTKFIQPTDTTMIRPLPVKPKPKARAKQRLGARTVLPPSQAKLDTFLWPRTADWLGRWFGGHGPSSRTSPEDEDKQEDGGE