Sequence detailsbmy_06022 (Coding sequence)

Part of scaffold_216 (SequenceType object (1))

For more information consult the page for scaffold_216 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAIPENSTTRG00000004899 (Bottlenosed dolphin)

Gene Details

TRAF interacting protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004620, Bottlenosed dolphin)

Protein Percentage 96.84%
cDNA percentage 97.82%
Ka/Ks Ratio 0.56564 (Ka = 0.0189, Ks = 0.0334)

BT.102673ENSBTAG00000004877 (Cow)

Gene Details

TRAF-interacting protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054002, Cow)

Protein Percentage 88.62%
cDNA percentage 91.44%
Ka/Ks Ratio 0.28331 (Ka = 0.0589, Ks = 0.2077)

TRAIP (Minke Whale)

Gene Details

TRAF interacting protein

External Links

Gene match (Identifier: BACU002388, Minke Whale)

Protein Percentage 97.82%
cDNA percentage 98.38%
Ka/Ks Ratio 0.50337 (Ka = 0.0137, Ks = 0.0272)

Additional orthologs identified in other species via the OPTIC pipeline.

TRAIP (Human)   Traip (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1335 bp    Location:1293597..1267465   Strand:-
Raw sequence 
>bmy_06022
ATGCCTATCCGTGCTCTGTGTACCATTTGCTCTGACTTCTTCGATCACTCCCGCGACGTGGCCGCCATTCACTGCGGCCACACCTTCCACTTGCAGTGCCTAATTCAGTGGTTCGAGACAGCACCAAGTCGGACCTGCCCGCAGTGCCGAATCCAGGTTGGCAAAAGAACCATTATCAATAAGCTCTTCTTTGACCTTGCCCAGGAGGAGGAGAGTGTCTTAGATGCAGAATTCTTAAAGAATGAACTGGATAATACCAGAGCCCTGCTTTCCCAGAAAGAGAAGGAAAAACGAGACAGCCAGCTCATCATTGACACTCTGCGGGACACGCTGGAAGAACGCAACGCCACTGTTGAATCCCTGCAGAAGGCCTTAGACAAGGCTGAGATGCTGTGCTCCACCCTCAAGAAGCAGATGAAGTACTTGGAACAGCAGCAGGATGAGACCAAACAAGCACGGGAGGAGGCCCGCCGGCTCCGGAACAAGATGAAGACCATGGAGCGGATTGAGCTCCTACTCCAGAGTCAGCGGCCCGAGGTGGAGGAGATGATCCGAGACATGGGTGTGGGACAGTCAGCGGTGGAGCAGTTGGCTGTGTACTGCGTGTCCCTCAAGAAAGAGTACGAGAATCTAAAAGAGGCGCGGAAGGCCTCAGGGGAGCTAGCCGACAAACTGAAGAAGGACTTGTTTTCTTCCAGAAACAAGTTGCAGACAGTCTACTCTGAACTGGACCAGGCCAAGTTGGAGCTGAAGTCGGCCCAGAAGGACTTACAGAGTGCTGACAAGGAAATCGCAAGCCTGAGAAAAAAGCTAACGATGCTGCAGGAAACCCTGAACCTGCCACCAGTGGACAGTGAGACTGTCAACCGCCTGGTTTTAGAGAGCCCAGCTCCTGTGGAGATGCTGAACCTGAAGCTTCGCCAGCCAGCCTTCGGCGATGATATTGACCTCAATGTCACCTTTAATGTGGATACTCCCCCAGCCCAGCCCTCCAGCACCCAGCATGGCCATGCCAAGAGGCTCTTCCCAGAGAAGGCACAGCTTATCAAGCCTGGCTCTGGGGTAAGGACCGGCTTCGATGGACTTGGAGGCCGGACAAAATTCATCCAGCCTACTGACACGACTATGATCCGCCCACTGCCCGTTAAACCCAAGCCCAAGGCCAGGGCTAAGCAGAGACTGGGGGCCAGGACAGTGCTCCCTCCCTCCCAGGCCAAGCTGGACACCTTCCTGTGGCCGAGGACTGCTGACTGGCTCGGCAGATGGTTTGGGGGGCATGGCCCCTCTTCTAGGACCAGCCCTGAGGACGAGGATAAACAAGAAGATGGGGGTGAA

Related Sequences

bmy_06022T0 SequenceType object (3)

Length: 445 aa      View alignments
>bmy_06022T0
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEESVLDAEFLKNELDNTRALLSQKEKEKRDSQLIIDTLRDTLEERNATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAREEARRLRNKMKTMERIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSRNKLQTVYSELDQAKLELKSAQKDLQSADKEIASLRKKLTMLQETLNLPPVDSETVNRLVLESPAPVEMLNLKLRQPAFGDDIDLNVTFNVDTPPAQPSSTQHGHAKRLFPEKAQLIKPGSGVRTGFDGLGGRTKFIQPTDTTMIRPLPVKPKPKARAKQRLGARTVLPPSQAKLDTFLWPRTADWLGRWFGGHGPSSRTSPEDEDKQEDGGE