Part of scaffold_216 (Scaffold)

For more information consult the page for scaffold_216 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBM5 ENSTTRG00000007717 (Bottlenosed dolphin)

Gene Details

RNA binding motif protein 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007300, Bottlenosed dolphin)

Protein Percentage 92.91%
cDNA percentage 92.54%
Ka/Ks Ratio 0.17288 (Ka = 0.0079, Ks = 0.0454)

RBM5 ENSBTAG00000006330 (Cow)

Gene Details

RNA-binding protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008305, Cow)

Protein Percentage 98.38%
cDNA percentage 95.87%
Ka/Ks Ratio 0.06704 (Ka = 0.0099, Ks = 0.1483)

RBM5  (Minke Whale)

Gene Details

RNA binding motif protein 5

External Links

Gene match (Identifier: BACU002382, Minke Whale)

Protein Percentage 93.52%
cDNA percentage 94.62%
Ka/Ks Ratio 0.50629 (Ka = 0.047, Ks = 0.0928)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2229 bp    Location:1471699..1497029   Strand:+
>bmy_06031
ATGGGTTCAGACAAACGAGTGAGTAGAACAGAACGCAGTGGAAGATACGGGTCCATCATAGACAGGGATGATCGTGATGAGCGTGAATCCAGAAGCAGGAGGAGGGACTCAGATTACAAAAGATCTAGTGATGATCGGAGGGGTGATAGATATGATGACTACCGAGACTATGACAGTCCAGAGATTCGAGAAATGATGGAATCCTTTGAAGGCCCTCAGCCTGCGGACGTGAGGCTAATGAAGAGGAAAACAGGTGTAAGCCGTGGTTTCGCCTTCGTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGGATGGAAGCCAATCAGAAAAAGCTGGTGATTCAAGGAAAGCATATTGCAATGCATTATAGCAATCCCAGACCTAAGTTTGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGCCCCCTGGAACCACAGAATCAGTTCAGTCTGTGGATTACTACTGTGATACAATCATACTTCGAAACATAGCTCCACACACCGTGGTGGATTCCATCATGACAGCGCTGTCTCCCTACGCGTCCTTAGCTGTCAATAACATTCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGCTTTGCGTTTGTGCAGCTGTCTTCTGCAATGGATGCTTCTCAGCTGCTTCAGATACTACAGAGTCTCCATCCTCCTTTGAAAATTGATGGCAAAACTATTGGGGTTGATTTTGCAAAAAGTGCCAGAAAAGACTTGGTCCTCCCAGATGGTAACCGGGTCAGTGCTTTCTCCGTGGCTAGTACAGCCATTGCTGCCGCTCAGTGGTCTTCCACCCAGTCTCAGAGTGGTGAAGGAGGCAATGTTGACTACAGTTACCTGCAGCCAGGCCAAGATGGCTACGCCCAGTATGCTCAGTACTCACAGGATTACCAACAGTTTTATCAGCAACAGGCTGGAGGATTGGAATCTGATGCATCATCTGCATCAGGCACAGCGGTGACCACCACCTCAGCAGCTGTAGTATCTCAGAGTCCCCAGCTATATAATCAGACGTCCAATCCACCCGGCTCTCCGACTGAGGAAGCACAGCCTAGCACTAGCACAAGTACACAGGCCCCAGCCGCTTCCCCCACTGGTGTAGTTCCTGGTACCAAATATGGTAAGCCAAACCTCATGGGGCTGTTGACATACTACTACAATTCCTTAACCCAGCAGTACCTGTACTGGGATGGAGAGAAGGAGACTTACGTGCTGGCTGCGGAGTCTAACTCCCACCAGCAGACGGGCCTACCTCCTGCAAAAGAGGGGAAGGAAAAGAAGGAGAAACCCAAGAGCAAAACAGCACAGCAGATTGCCAAAGACATGGAACGCTGGGCTAAGAGTTTAAACAAGCAGAAAGAAAATTTTAAAAACAGCTTTCAACCTGTAAATTCTTTGAGGGAAGAAGAAAGGAGAGAATCTGCTGCAGCAGATGCTGGCTTTGCTCTCTTTGAGAAGAAGGGAGCCTTAGCAGAAAGGCAGCAGCTCATCCCCGAATTGGTGCGAAATGGAGACGAGGAGAATCCCCTCAAAAGGGGTCTGGTTGCTGCTTACAGTGGTGACAGTGACAATGAAGAGGAGCTGGTGGAGAGACTTGAGAGTGAAGAAGAAAAGCTGGCCGACTGGAAGAAGATGGCCTGCCTGCTCTGCCGGCGCCAGTTCCCAAACAGAGACGCCCTGGTCAGGCACCAGCAGCTCTCAGACCTACACAAGCAAAACATGGACATCTACCGACGATCCAGGCTGAGCGAGCAGGAGCTGGAAGCCTTGGAGCTGAGGGAGAGAGAGATGAAATACCGGGATCGAGCTGCAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAACCTAAGCGCAAGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGCAGCCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGCAGGCCATGGGTTGGCGGGAAGGCTCAGGTTTGGGAAGAAAGTGTCAAGGCATCACAGCCCCCATTGAGGCTCAAGTCCGGCTAAAAGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATACGGACTGTCTGGTGCAGATTCCTACAAAGATGCTGTCCGGAAGGCCATGTTTGCCCGGTTCACTGAGATGGAGTGA

Related Sequences

bmy_06031T0 Protein

Length: 743 aa      View alignments
>bmy_06031T0
MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPEIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGNVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYGKPNLMGLLTYYYNSLTQQYLYWDGEKETYVLAAESNSHQQTGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNRDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME*