Sequence detailsbmy_06032 (Coding sequence)

Part of scaffold_216 (SequenceType object (1))

For more information consult the page for scaffold_216 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA3FENSTTRG00000007720 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007302, Bottlenosed dolphin)

Protein Percentage 95.03%
cDNA percentage 94.98%
Ka/Ks Ratio 0.21535 (Ka = 0.0312, Ks = 0.1448)

SEMA3FENSBTAG00000018307 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024362, Cow)

Protein Percentage 91.76%
cDNA percentage 91.59%
Ka/Ks Ratio 0.15634 (Ka = 0.0472, Ks = 0.3019)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA3F (Human)   Sema3f (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2331 bp    Location:1545707..1555533   Strand:+
Raw sequence 
>bmy_06032
GTACGGCTGGATGGTCTCCAAGAGCCCTCACTGCTGCTCTGCCCTCTGCCCACAGAGCTTAAGGCCACAGGCACGGCCCACTTCTTCAACTTCCTGCTCAACACAACTGATTACCGAATCCTGCTCAAGGATGAGGACCACGACCGCATGTATGTGGGCAGCAAGGACTACGTGCTGTCCCTGGACCTGCATGACATCAACCGCGAGCCCCTCATTATCCACTGGGCAGCCTCCCCACAGCGCATTGAGGAGTGCGTGCTCTCAGGCAAGGATGGCAACGGTGAGTGCGGGAACTTCGTCAGACTCATCCAGCCCTGGAACCGAACACACCTGTATGTGTGCGGGACCGGCGCCTACAACCCCATGTGCACCTATGTAAACCGCGGCCGCCGCGCGCAGGCCACGCCCTGGACCCAGATGCAGGTGGTCAGAGGCCGAGGCAGCAGAGCCACTGATGATGCCCTCCACCCGACGCCCACAGCCCCACGCCAGGATTACATCTTCTACCTGGAGCCTGAGAAACTCGAGTCAGGAAAGGGCAAGTGTCCCTACGACCCCAAGCTGGACACAGCCTCAGCCCTCATCAATGAGGAGCTCTATGCGGGTGTGTACATCGACTTCATGGGCACCGACGCAGCCATCTTCCGCACGCTTGGAAAGCAGACGGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTCAATGACCCTTCATTCATCCATGCCGAGCTCATCCCTGACAGCGCCGAGCGCAACGACGACAAGCTCTACTTCTTCTTCCGTGAGCGGTCCGCGGAGGCACCGCAGAGCCCCGCCGTGTATGCCCGCATCGGGCGGATCTGCCTGAACGATGACGGCGGCCACTGCTGCCTGGTCAACAAGTGGAGCACATTCCTGAAGGCAAGGCTGGTCTGCTCTGTGCCAGGCGAGGATGGCATCGAGACCCACTTTGACGAGCTCCGACCCCATCCTGGTGGGGAGCTGTGGGTGAGGGCAGGCTGGGGAGGGACCCTGGGCCAAGGGTCTGCCCCACCCGCAGCAGCAGCCTGCCTTGCCCGCAGCTCTGTGTTCCGAGGCTCTGCCGTGTGTGTCTACTCCATGGCTGACATTCGCATGGTCTTCAATGGGCCCTTTGCCCACAAGGAGGGCCCCAACTACCAATGGATGCCCTTCTCAGGGAAGATGCCCTACCCACGGCCCGGCACGTGCCCTGGTGGAACCTTCACGCCATCCATGAAGTCCACCAAGGACTATCCTGATGAAGTGATCAACTTCATGCGCACCCACCCACTCATGTACCAGGCCGTTTACCCTCTGCAGCGGCGGCCCCTAGTGGTCCGCACAGGCGCTCCCTACCGTCTCACCACTGTTGCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTATGAGGTGCTTTTCCTGGGCACAGACCGCGGGACAGTGCAGAAGGTCATCGTGCTGCCTAAGGATGACCAGGAGATGGAGGAGCTCATGCTAGAGGAGGTGGAGGTCTTCAAGGACCCAGCACCTGTTAAGACCATGACCATCTCTTCCAAGAGGCAACAACTGTACGTGGCCTCAGCCGTGGGCGTCACACACCTGAGCCTGCACCGCTGCCAGGCATATGGGGCCGCCTGTGCCGACTGCTGCCTTGCCCGGGACCCCTACTGTGCCTGGGATGGCCAAGCCTGTTCCCGCTATACAGCGTCCTCTAAGAGGAGGAGCCGCCGGCAGGACGTCCGGCACGGGAACCCCATCAGGCAGTGCCGTGGGTTCAATTCCAACGCCAATAAGAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCAGGGAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAGGCTACCGTTAAGTGGCTGTTCCAGCGAGATCCCAGTGACCGGCGCAGAGAGATGCGTGCAGACGACCGCTTCCTGCGCACGGAACAGGGCTTGCTGCTTCGCGCCCTGCAGCTTGGTGATCGCGGCCTCTACTCCTGTACAGCCACCGAGAACAACTTCAAGCATGTCATCACACGAGTGCAGCTGCATGTACTGGGCCAGGACGCCGTCCATGCTGCCCTCTTCCCACCCCCAGCTGTGAGCGTCCCACCGCCCTCAGGTGCCGGGCCCCCCACACCCCCTTACCAGGAGCTGGCCCAGCTCCTGGCCCAGCCTGAAGTGGGCCTCATCCACCAGTACTGCCAGGGCTACTGGCGCCATGTGCCCCCCAGTCCCAGGGAGGCCCCAGGGGCACCCAGGCCTCCTGAACCCCAGGACCGGAAAAAACCCCGGAACCGCCGCCACCACCCGCCGGACACATGA

Related Sequences

bmy_06032T0 SequenceType object (3)

Length: 777 aa      View alignments
>bmy_06032T0
VRLDGLQEPSLLLCPLPTELKATGTAHFFNFLLNTTDYRILLKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECVLSGKDGNGECGNFVRLIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQATPWTQMQVVRGRGSRATDDALHPTPTAPRQDYIFYLEPEKLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQTAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQSPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELRPHPGGELWVRAGWGGTLGQGSAPPAAAACLARSSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRTHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEVLFLGTDRGTVQKVIVLPKDDQEMEELMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRGFNSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPSDRRREMRADDRFLRTEQGLLLRALQLGDRGLYSCTATENNFKHVITRVQLHVLGQDAVHAALFPPPAVSVPPPSGAGPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPGAPRPPEPQDRKKPRNRRHHPPDT*