Part of scaffold_225 (Scaffold)

For more information consult the page for scaffold_225 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IDO1 ENSTTRG00000010992 (Bottlenosed dolphin)

Gene Details

indoleamine 2,3-dioxygenase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010422, Bottlenosed dolphin)

Protein Percentage 93.23%
cDNA percentage 94.97%
Ka/Ks Ratio 0.62153 (Ka = 0.0451, Ks = 0.0726)

BT.19792 ENSBTAG00000020602 (Cow)

Gene Details

indoleamine 2,3-dioxygenase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027449, Cow)

Protein Percentage 81.25%
cDNA percentage 84.03%
Ka/Ks Ratio 0.28489 (Ka = 0.1139, Ks = 0.4)

IDO1  (Minke Whale)

Gene Details

indoleamine 2,3-dioxygenase 1

External Links

Gene match (Identifier: BACU007441, Minke Whale)

Protein Percentage 48.06%
cDNA percentage 59.87%
Ka/Ks Ratio 0.84278 (Ka = 0.589, Ks = 0.6989)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 627 bp    Location:1049729..1062035   Strand:+
>bmy_06098
ATGGCACCTGACAAATCATCTCCTGTGGAAAATTCTTGGAAGATCTTTGAAGAATACCACATAGATGAAGATGTGGGCTTTGCTCTGCCCAATCCACTGTTAACAACCTTCAGCATTGACGGCCTCCAAGGACACAAGTCACAGCGCCTTGCACATCTGGTTCTGGGGTATATCACCATGGCGTACGTGTGGGGTGAAGGTGATGGAGATGTCCGGAAGGTCTTGCCAAGCAATATTGCTGTTCCTTACTGCAAGGTATCTGAGAAGCTAGGACTGCCCCCTATTCTGGTTTATGCAGATTGTGTCTTGGCAAACTGGAAGAAAAAGGATCCCAGTGGGTATGTAAACAGTGATTATAACAGGAATGAAAGGAGTGCACACTATTTGAATCAAGGGGTGAACATGGACATCCTATTCTCGTTCCCTGGCGGGGACTGTGGTAAAGGGTTCTTCCTGGTCTCTCTGGTGGTGGAAACAGCAGCTGCTTCTGCAATCAAAGTGATCCCCATTATATTTAATGCAATACAACGTGAAGACCCAGATACTTTGCAAAAGGCATTGCTTGATGTAACTTCTTGTCTGCACAAAGCCCATGAAACGTTTCACCAAATTCATGGCAAGTATTAA

Related Sequences

bmy_06098T0 Protein

Length: 209 aa      View alignments
>bmy_06098T0
MAPDKSSPVENSWKIFEEYHIDEDVGFALPNPLLTTFSIDGLQGHKSQRLAHLVLGYITMAYVWGEGDGDVRKVLPSNIAVPYCKVSEKLGLPPILVYADCVLANWKKKDPSGYVNSDYNRNERSAHYLNQGVNMDILFSFPGGDCGKGFFLVSLVVETAAASAIKVIPIIFNAIQREDPDTLQKALLDVTSCLHKAHETFHQIHGKY*