Part of scaffold_228 (Scaffold)

For more information consult the page for scaffold_228 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRKAA1 ENSTTRG00000010908 (Bottlenosed dolphin)

Gene Details

protein kinase, AMP-activated, alpha 1 catalytic subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010343, Bottlenosed dolphin)

Protein Percentage 98.47%
cDNA percentage 98.15%
Ka/Ks Ratio 0.10641 (Ka = 0.0073, Ks = 0.0681)

BT.78334 ENSBTAG00000000013 (Cow)

Gene Details

5'-AMP-activated protein kinase catalytic subunit alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000017, Cow)

Protein Percentage 98.28%
cDNA percentage 96.31%
Ka/Ks Ratio 0.05213 (Ka = 0.0082, Ks = 0.1581)

PRKAA1  (Minke Whale)

Gene Details

protein kinase, AMP-activated, alpha 1 catalytic subunit

External Links

Gene match (Identifier: BACU014998, Minke Whale)

Protein Percentage 98.26%
cDNA percentage 98.19%
Ka/Ks Ratio 0.2595 (Ka = 0.0115, Ks = 0.0444)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location:289320..305392   Strand:+
>bmy_06109
ATTAAAATTATTTCTCCTACAGTTGGCAAACATGAATTGACTGGGCATAAAGTTGCTGTGAAGATACTCAATCGACAGAAGATTCGAAGCCTTGATGTAGTAGGAAAAATCCGCAGAGAAATTCAGAACCTCAAGCTTTTCAGGCATCCTCATATAATTAAACTGTACCAGGTCATCAGTACACCATCTGATATTTTCATGGTGATGGAATATGTCTCAGGAGGAGAGCTATTTGATTATATCTGTAAAAATGGAAGGCTGGATGAAAAAGAAAGTCGGCGTCTGTTCCAACAAATCCTTTCTGGTGTGGATTATTGTCACAGGCATATGGTGGTCCACAGAGATTTGAAACCTGAAAATGTCCTGCTTGATGCACACATGAATGCAAAGATTGCTGATTTTGGTCTTTCAAACATGATGTCAGATGGTGAATTTTTAAGAACAAGTTGTGGCTCACCCAACTATGCTGCACCAGAAGTAATTTCAGGAAGATTGTATGCTGGTCCAGAGGTAGATATATGGAGCAGTGGGGTTATTCTCTATGCTTTATTATGTGGAACACTTCCATTCGATGATGATCATGTGCCAACTCTTTTTAAGAAGATATGTGATGGGATCTTTTATACCCCTCAGTATTTAAACCCTGCTGTGATTAGCCTTTTGAAACATATGCTGCAGGTGGATCCCATGAAGAGAGCCACAATCAAAGATATCAGGGAACATGAATGGTTTAAACAGGACCTTCCAAAATATCTCTTTCCTGAGGATCCATCATATAGTTCAACCATGATTGATGATGAAGCCTTAAAAGAAGTATGTGAAAAATTTGAATGCTCAGAAGAGGAGGTTCTCAGCTGCCTTTATAACAGAAATCACCAGGACCCTTTGGCAGTTGCCTACCACCTCATAATAGATAACAGGAGAATAATGAATGAGGCCAAAGATTTTTACTTGGCAACAAGCCCACCTGATTCTTTTCTCGATGATCACCACTTGACCCGGCCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACCCTCGATGAATTAAATCCACAGAAATCCAAACACCAAGGTGTAAGGAAAGCAAAATGGCATTTGGGAATTAGAAGTCAAAGTCGACCAAATGATATCATGGCAGAAGTTTGTAGAGCCATTAAACAACTGGATTATGAATGGAAGGTTGTAAACCCATATTATTTGCGTGTTCGAAGGAAGAATCCTGTGACAAGTACATTCTCCAAAATGAGTCTACARTTATACCAAGTGGACAGTAGAACATACTTATTGGATTTCCGTAGTATTGATGATGAAATTACTGAAGCCAAATCAGGGACTGCTACTCCACAGAGATCGGGCTCAGTTAGCAACTATCGAGCTTGCCAAAGGAATGATTCAGATGCTGAGGCTCAAGGAAAATCCTCAGAAGCTTCTCTTACCTCATCTGTAACCTCACTTGACTCTTCTCCTGTTGACTTAACTCCAAGACCTGGAAGTCACACAATAGAATTTTTTGAGATGTGTGCAAATCTAATTAAAATTCTTGCACAGTAA

Related Sequences

bmy_06109T0 Protein

Length: 525 aa      View alignments
>bmy_06109T0
IKIISPTVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPAVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSVSNYRACQRNDSDAEAQGKSSEASLTSSVTSLDSSPVDLTPRPGSHTIEFFEMCANLIKILAQ*