Part of scaffold_228 (Scaffold)

For more information consult the page for scaffold_228 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTGER4 ENSTTRG00000010883 (Bottlenosed dolphin)

Gene Details

prostaglandin E receptor 4 (subtype EP4)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010319, Bottlenosed dolphin)

Protein Percentage 71.06%
cDNA percentage 75.93%
Ka/Ks Ratio 0.39021 (Ka = 0.1282, Ks = 0.3285)

PTGER4 ENSBTAG00000014972 (Cow)

Gene Details

prostaglandin E2 receptor EP4 subtype

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019930, Cow)

Protein Percentage 81.3%
cDNA percentage 85.46%
Ka/Ks Ratio 0.2897 (Ka = 0.1242, Ks = 0.4286)

PTGER4  (Minke Whale)

Gene Details

prostaglandin E receptor 4 (subtype EP4)

External Links

Gene match (Identifier: BACU014999, Minke Whale)

Protein Percentage 86.97%
cDNA percentage 89.52%
Ka/Ks Ratio 0.37984 (Ka = 0.0922, Ks = 0.2427)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1062 bp    Location:368456..366352   Strand:-
>bmy_06111
ATGGCCACCCCTGGAAGCAATGCATCCGCCCTGGCCTCCGACCGACTGAACAGCCCAGTGACCATCCCGGCGGTGATGTTCATCTTCGGGGTGGTGGGCAACCTGGTGGCCATCGTGGTGCTGTGCAAGTCGCGCAAAGAGCAGAAGGAGACGACTTTCTACACACTGGTGTGCGGGCTGGCGGTCACCGACCTGCTGGGCACGTTGCTGGTGAGCCCGGTGACCATCGCCACGTACATGAAGGGCCAGTGGCCCGGGGGCCCCGCGCTGTGCGAGTACAGCACCTTCATCCTGCTCTTCTTCGGCCTGTCGGGGCTCAGCATCATCTGTGCCATGAGTATCGAGCGCTACCTGGCCATCAACCACGCCTACTTCTACAGCCACTACGTGGACAAGCGGCTGGCGGGCCTCACGCTCTTCGCGGTCTACGCGTCCAACGTGCTCTTCTGCGCGCTGCCCAACATGGGCCTCGGCAGCTCGCGGCTGCAGTACCCGGACACCTGGTGCTTCATCGACTGGACCACCAATGTGACGGCGCACGCCGCCTTCTCCTACATGTACGCGGGCTTCAGTTCCTTCCTCATTCTCGCCACCGTGCTCTGCAACGTGCTCGTGTGCGCGGCGCTGCTCCGCATGCACCGTCAGTTCATGCGCCGCACCTCGCTGGGCACCGAGCAGCACCACGCGGCCGCAACCGCCGTCGCCGTGGCCCAGGCCGCCTGCCGGGGCTCCTCGGCCGCCGCCTCCCCCGCCCTGCCGCGCCTCAGCGACTTTCGCCGCCGCCGGAGCTTCCGCCGCATCGCGGGCGCCGAGATCCAGATGGTCATCTTACTCATCGCCACCTCTCTGGTGGTGCTGATCTGCTCCATCCCGCTTGTGGTGAGTGGCTGGGGCCAGGGCCCCACTCGGCCCTTTTCCTGCATCCACCTCCCTCCTCCATCTCCCTCTCCCTCCTCTCCCTCTCATTCTTCGGCCACCAACGCGTCTCCTCCAGGTCGGGGCTGGATCTCCACGCTCTGCTTCTCAGAGCAGGCCCAACCTCTTTTTACGCCCCGTCGCTAA

Related Sequences

bmy_06111T0 Protein

Length: 354 aa      View alignments
>bmy_06111T0
MATPGSNASALASDRLNSPVTIPAVMFIFGVVGNLVAIVVLCKSRKEQKETTFYTLVCGLAVTDLLGTLLVSPVTIATYMKGQWPGGPALCEYSTFILLFFGLSGLSIICAMSIERYLAINHAYFYSHYVDKRLAGLTLFAVYASNVLFCALPNMGLGSSRLQYPDTWCFIDWTTNVTAHAAFSYMYAGFSSFLILATVLCNVLVCAALLRMHRQFMRRTSLGTEQHHAAATAVAVAQAACRGSSAAASPALPRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLICSIPLVVSGWGQGPTRPFSCIHLPPPSPSPSSPSHSSATNASPPGRGWISTLCFSEQAQPLFTPRR*