Part of scaffold_222 (Scaffold)

For more information consult the page for scaffold_222 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPRS ENSTTRG00000009909 (Bottlenosed dolphin)

Gene Details

coordinator of PRMT5, differentiation stimulator

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009397, Bottlenosed dolphin)

Protein Percentage 71.43%
cDNA percentage 77.94%
Ka/Ks Ratio 0.44301 (Ka = 0.2198, Ks = 0.4961)

COPR5 ENSBTAG00000001885 (Cow)

Gene Details

Cooperator of PRMT5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002453, Cow)

Protein Percentage 59.62%
cDNA percentage 69.66%
Ka/Ks Ratio 0.34482 (Ka = 0.3225, Ks = 0.9352)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 633 bp    Location:734825..744586   Strand:+
>bmy_06121
ATGCCCGCCGCAGGTCCTCGCCCTGAGCTGGGGCAGCACCGAGACAAAAGGAACCCACAGCGGGAAGACGACCAAGGGTCCCCCAGAAAAGCAAACACGAGTGAGGCATTCAGAAAATTGACAGAGGCAAGTGATGATTCAGCAGCAGAAGGGGAACAGAACGTTGCCAATCAATTACAAATAGGGAACTTCACAGACTCACCTCAACTGACAGCAAAGGCTGCAAATCAGGGGGTCCTGGGGGGCCACCAGGCATGGACCCCTGGCTTTGTCCCAGCTGATCACTCCGGTCAGGAGAGAGAGACTAAGAAGGCCAGGGATCAACTCGCTAGTGGAGCACAGAGCATCCCTCATGATAGTCCTACCCGTGGTGATGGCACCCATTCTGAAGAGGAAGGCTTTGCTGTGGATGATGAGGATTCTGATGGGGAACCGAATACCTGGGAGCTGTCAGAAGAGGTATCCGGCTGTCCACCCGAGGAACAGGCTGCTGATCTTTTTAATGAGGATTGGGACCTGGAGTTGAAGGCAGAGGTCAGACCTTGGGTGTGCTGTGCCCCACAAGGAGACATGACCTATAACCCAGCTCCATCCACATCCACTCGTGTCCCATTATTCCAAGATCTCCTTTGA

Related Sequences

bmy_06121T0 Protein

Length: 211 aa      View alignments
>bmy_06121T0
MPAAGPRPELGQHRDKRNPQREDDQGSPRKANTSEAFRKLTEASDDSAAEGEQNVANQLQIGNFTDSPQLTAKAANQGVLGGHQAWTPGFVPADHSGQERETKKARDQLASGAQSIPHDSPTRGDGTHSEEEGFAVDDEDSDGEPNTWELSEEVSGCPPEEQAADLFNEDWDLELKAEVRPWVCCAPQGDMTYNPAPSTSTRVPLFQDLL*