Part of scaffold_227 (Scaffold)

For more information consult the page for scaffold_227 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DNAAF2 ENSTTRG00000007660 (Bottlenosed dolphin)

Gene Details

dynein, axonemal, assembly factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007241, Bottlenosed dolphin)

Protein Percentage 95.21%
cDNA percentage 97.45%
Ka/Ks Ratio 0.60835 (Ka = 0.0207, Ks = 0.034)

bta-mir-6517 ENSBTAG00000004930 (Cow)

Gene Details

bta-mir-6517

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042390, Cow)

Protein Percentage 87.74%
cDNA percentage 91.44%
Ka/Ks Ratio 0.37678 (Ka = 0.0632, Ks = 0.1678)

DNAAF2  (Minke Whale)

Gene Details

dynein, axonemal, assembly factor 2

External Links

Gene match (Identifier: BACU015317, Minke Whale)

Protein Percentage 95.4%
cDNA percentage 97.0%
Ka/Ks Ratio 0.688 (Ka = 0.0269, Ks = 0.0391)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1725 bp    Location:114895..108121   Strand:-
>bmy_06159
ATGGCAACGAGCACACGCTGCCCGAGGCTCAATTCTCTGGCGGTTACAGACCTCCGCCGCCTCACTCTCCGCAGACCAGCGACTCTACGACGCGTTCCTCCCACTCGGTCTCAGATTCATCTCCCTTGGCCCCTGGGCAAGGAGCCGAGGGGCAGCATGGCCAAGGCGGCAGCCTCTTCGCCGCTGGAAGACTTGGACCTGAGCGGAGAGGAGGTCCAGCAGCTCACCTCCGCCTTCCAGGACCCGGAGTTCCGGCGAATGTTCTCCGAGTACGCCGAGGAGATTACGGACCCCGAGAACCGGCGGCGCTACGAGGAGGAGATCACGGCCCTGGAGCGTGAGCGCGGAGTGGAGGTGCGGTTCGTGCACCCGGAACCGGGCCACGTGTTGCGCACCAGCCTGGATGGGACCCGGCGCTGCTTCGTGAACGTGTGCAGCAACGCGCTGGTGTGCGCGCCCAGCAGCCGGCCCGGCTCCAGGGGCGCGGCATCCGGCAGCCAGTGGTCCCTGCCCTACAGCCTGGCGCCGGGCCGCGAGTACGCTGGGGGCCGCGGAAGCCGCTACACCGTCTACGACGTGGTCTTCCACCCAGACGCGCTCGCGCTGGCCCGACGCCATGAGCGCTTCCGCCAGATGCTGGACGCCACGGCCCTGGAGGCCGTGGAGAAGCAGTTCGGCGTGAAGTTGGACCGCAGGAATGCCAAGATCCTGAAGGTCAAGGAGCCAGCTGATCGAGCCATGGGTGCTCCCGGGACCGACCGCGGGGAACCTCTGTGTCCGCCTTTGCAGTGTAATCAGGATGAAGAATCCCTGACTCTGCTCATTCAAGTGCCTCGGATCCAGCCTCAAAGTCTTCAAGGGGAAGTGACCCCCCTCTGGTACAAATTGTCCTTCTCCACCCAAGACTTAGTTTATTATTCCTTCTTTTTGCAATTTACTCCAGGRAATAAGCTGAATACCAAAGAACCAGTGGTTAGCATTTCTTCAAACAATGCAGTGATAGAACTGGCCAAATCTCCAGAGTGCCATGGACAGTGGAGAGAGTGGTATTATGGTTTAAACAACGATTCTTTGGAGGAAAGGTTATTTGTCAGTGAAGAAAACGTTAATGAGTTTCTTGAAGAGGTCCTGAGCCCTCCATTCAAACAGACAATGCCCCTAACCCCACCATTAATTGAAGTTCTTCAGGTTACTGATAGTAAGATTGAAATACATGCAAAGTTGCAAGAATGTAGTAACTCTGAGCAGCTTCATGAGAAGGAAGAAAGAGTCAATGAAGGAAGTCATCTAACTGAAAAAGAAAGTCTAGAACATGCTACTACCTCAGCTGATTCCCATTCATCTGTAGCAGTCAAAGTACTAGAAACAGACAGTTGTGGTTCAGTTGCATGCATGCAACAAGGGGCCCTTGATGTTTCTCAAAAGCCGTCTGCAAAGTCTCAGCAACCTGAGTCAAAAATGGAACCTGAATTTACAAAAGACAAAAGTGCTGTTCACTCAAATGACGGAAAAGATAATTTAAAAGAACSAGTAATAACTGAAGAGAAAGAATTAGATGGAGATCACCCATCTTCATTACTGAACAAAACTGCAGTTCACAATACACCTGGTTTTGACAACATAAAGGAAACCAATATGCAGGATGGTAGTGTGCAGATTATTAAAGATCATGTGACTCATTGCTCATTCAGTTTTCAGAATTCTTTGCTTTATGACTTGGATTAA

Related Sequences

bmy_06159T0 Protein

Length: 575 aa      View alignments
>bmy_06159T0
MATSTRCPRLNSLAVTDLRRLTLRRPATLRRVPPTRSQIHLPWPLGKEPRGSMAKAAASSPLEDLDLSGEEVQQLTSAFQDPEFRRMFSEYAEEITDPENRRRYEEEITALERERGVEVRFVHPEPGHVLRTSLDGTRRCFVNVCSNALVCAPSSRPGSRGAASGSQWSLPYSLAPGREYAGGRGSRYTVYDVVFHPDALALARRHERFRQMLDATALEAVEKQFGVKLDRRNAKILKVKEPADRAMGAPGTDRGEPLCPPLQCNQDEESLTLLIQVPRIQPQSLQGEVTPLWYKLSFSTQDLVYYSFFLQFTPGNKLNTKEPVVSISSNNAVIELAKSPECHGQWREWYYGLNNDSLEERLFVSEENVNEFLEEVLSPPFKQTMPLTPPLIEVLQVTDSKIEIHAKLQECSNSEQLHEKEERVNEGSHLTEKESLEHATTSADSHSSVAVKVLETDSCGSVACMQQGALDVSQKPSAKSQQPESKMEPEFTKDKSAVHSNDGKDNLKEXVITEEKELDGDHPSSLLNKTAVHNTPGFDNIKETNMQDGSVQIIKDHVTHCSFSFQNSLLYDLD*