Sequence details bmy_06164 (Coding sequence)

Part of scaffold_227 (Scaffold)

For more information consult the page for scaffold_227 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTSZ ENSTTRG00000008400 (Bottlenosed dolphin)

Gene Details

cathepsin Z

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007953, Bottlenosed dolphin)

Protein Percentage 73.55%
cDNA percentage 81.96%
Ka/Ks Ratio 0.23915 (Ka = 0.1519, Ks = 0.6353)

CTSZ ENSBTAG00000018784 (Cow)

Gene Details

cathepsin Z precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025007, Cow)

Protein Percentage 72.84%
cDNA percentage 79.97%
Ka/Ks Ratio 0.16316 (Ka = 0.1538, Ks = 0.9427)

CTSZ  (Minke Whale)

Gene Details

cathepsin Z

External Links

Gene match (Identifier: BACU015324, Minke Whale)

Protein Percentage 94.14%
cDNA percentage 97.45%
Ka/Ks Ratio 0.85546 (Ka = 0.0258, Ks = 0.0301)

Additional orthologs identified in other species via the OPTIC pipeline.

ARF6 (Human)   Arf6 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:312300..365049   Strand:+
Raw sequence 
>bmy_06164
ATGGGGAAGGTGCTGTCTAAGATCTTCGGGAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGACGCAGCCGGCAAGACAACCATCCTGTACAAGTTGAAGCTGGGCCAGTCGGTGACCACCATCCCCACCGTGGGTTTCAACGTGGAGACCGTGACTTACAAAAACGTCAAGTTCAACGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTCTGGCGGCATTACTACACCGGGACCCAGGGTCTGATCTTCGTAGTGGACTGCGCCGACCGCGACCGCATCGACGAGGCCCGCCAGGAGCTGCACCGCATTATCAATGACCGGGAGATGAGGGACGCCATAATCCTCATCTTCGCCAACAAGCAGGACCTGCCCGATGCCATGAAACCCCACGAGATCCAGGAGAAACTGGGCCTGACCCGGATTCGGGACAGGAACTGCTTCAGTGTGATTCTTCTGAATGGCAGAGTCAGCAGTCACATTCTGCTAAGTGATGGATGCACTCAACATACAGAACTGCTCAGAATTACAGAACACATGAAGCAGCTCATTTTAACCATTTCTTTGCTCATGACTATGAGAGGTGCTAACCTCACATTTCCATATGACCGGTGGATATTTCCAATTGCATATATTGCGACTCTTGCTGCTGGTGGAGCGGCGCAGGCCGGCTTCCACTTCCGCCCGGGCTGCCGGCCCCTGCGCGGGAACCAGCTCACCCAGTTGGGGCGCAAGACATACCCCCGGCCTCATGAGCACCTGTCCCCATCGGATCTGCCCAAGAGCTGGGACTGGCGCAACGCGGATGGGGTCAACTACGCCAGGGTCACCAGGAGCCAGCACATCTCCCAGGGCGGCGGCACAAGCCCAACGGCCGACCGGAGACCCAACAAACGCAAGGGGGCGTGGCCTTCAGCGCAGCACGTCAACGACGGCGGCAACGCCGGCTCCTGGGAGGCGGGCGACCACCTGCAGGGGTGGGAGCACGCCCGCCCGCGCCGCATCCCCGACGAGACCCGCAGCAACGACCAGGCCAAGGACCAAGAGTGTGACAAGTTTAACCAGTGCGGAACATGCACCGAATTCAAAGAGCGCCGTGTCATCCAGAACTACACCCTTTGGAAAGTTGGCGACTACGGCTCCGTCTCCGGGAGGGAAAAGGTGATGGCGGAAATCTACACAAGCGGTCCCATCAGGGGCGGTACGATGGCAACAGAAAAGATGTCTAACTACACTGGAGGCATCTATGCTGAATACCATGACAAGGCCTACATAAACCACATCATTTCCGTGGCCGGGTGGGGTGTCAGCGATGGGATGGAGCATTGA

Related Sequences

bmy_06164T0 Protein

Length: 445 aa      View alignments
>bmy_06164T0
MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNCFSVILLNGRVSSHILLSDGCTQHTELLRITEHMKQLILTISLLMTMRGANLTFPYDRWIFPIAYIATLAAGGAAQAGFHFRPGCRPLRGNQLTQLGRKTYPRPHEHLSPSDLPKSWDWRNADGVNYARVTRSQHISQGGGTSPTADRRPNKRKGAWPSAQHVNDGGNAGSWEAGDHLQGWEHARPRRIPDETRSNDQAKDQECDKFNQCGTCTEFKERRVIQNYTLWKVGDYGSVSGREKVMAEIYTSGPIRGGTMATEKMSNYTGGIYAEYHDKAYINHIISVAGWGVSDGMEH*