Part of scaffold_227 (Scaffold)

For more information consult the page for scaffold_227 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATL1 ENSTTRG00000009566 (Bottlenosed dolphin)

Gene Details

atlastin GTPase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009066, Bottlenosed dolphin)

Protein Percentage 97.18%
cDNA percentage 97.3%
Ka/Ks Ratio 0.22658 (Ka = 0.0093, Ks = 0.041)

ATL1 ENSBTAG00000014312 (Cow)

Gene Details

Atlastin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019032, Cow)

Protein Percentage 97.36%
cDNA percentage 95.86%
Ka/Ks Ratio 0.08847 (Ka = 0.0128, Ks = 0.1445)

ATL1  (Minke Whale)

Gene Details

atlastin GTPase 1

External Links

Gene match (Identifier: BACU015330, Minke Whale)

Protein Percentage 98.21%
cDNA percentage 98.94%
Ka/Ks Ratio 0.65848 (Ka = 0.0095, Ks = 0.0144)

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location:895789..973672   Strand:+
>bmy_06175
ATGGCCAAGAACCGCAGGGACAGAAACAGTTGGGGCGGCTTTTCAGAAAAGGGGTATGAATGGAGCTCTGAAGAGGAAGAGCCAGTGAAAAAGGCAGGACCAGTCCAAGTCCTCATTGTCAGAGATGACCATTCCTTTGAATTAGATGAAACTGCACTAAATCGGATCCTTCTCTCAGAGGCTATCAGGGACAAGGAGGTCGTTGCTGTATCTGTTGCTGGAGCATTTAGAAAAGGAAAATCATTCCTGATGGACTTCATGTTGAGATACATGTATAAGCAGGAATCAGTTGATTGGGTTGGAGATTACAATGAACCATTGACTGGCTTTTCGTGGAGAGGTGGGTCTGAACGAGAGACCACGGGAATCCAGATATGGAGTGAAGTCTTCCTTATCAATAAACCTGACGGTAAAAAGGTTGCAGTGCTATTGATGGATACTCAGGGAACCTTTGATAGTCAGTCAACTTTGAGAGATTCGGCCACAGTATTTGCCCTTAGCACAATGATCAGCTCAATACAGGTATATAACTTATCTCAAAATGTGCAGGAGGATGATCTTCAGCACCTTCAGAGTCTGATATTTCTTGTTCGAGACTGGAGTTTCCCATACGAATTTTCATATGGAGCTGACGGTGGCTCCGAATTCTTGGAAAAACGCCTCAAGGTCTCGGGGAACCAGCATGAAGAACTACAGAATGTTCGAAAACACATCCATTCCTGTTTCACCAAAATTTCCTGTTTTCTGCTACCTCATCCTGGCTTAAAAGTAGCTACCAATCCAAACTTTGATGGAAAACTGAAAGAAATAGATGAAGAATTCATCAAAAACTTGAAAATACTAATTCCTTGGCTACTTAGTCCTGAGAGCCTAGACATTAAAGAGATCAATGGGAACAAAATCACCTGCCGAGGTCTGGTGGAGTACTTCAAGGCTTATATAAAGATCTATCAAGGTGAAGAATTACCACATCCCAAATCCATGTTACAGGCCACAGCAGAAGCTAACAATTTAGCAGCCGTGGCAACTGCCAAGGATACATACCATAAAAAAATGGAAGAGATCTGTGGTGGTGACAAACCATTTCTGGCCCCTAATGACCTGCAGACGAGACATCTGGAACTTAAGGAAGAATCTGTGAAGCTATTCCGAGGGGTGAAGAAGATGGGTGGGGAGGAATTTAGCCGGCGTTACCTGCAACAGTTGGAGAGTGAAATAGATGAACTTTACATCCAGTACATCAAGCACAATGATAGCAAAAATATCTTCCATGCAGCTCGTACCCCAGCCACACTGTTTGTTGTCATCTTTATCACATATGTGATTGCTGGTGTGACTGGATTCATTGGTTTGGACATCATAGCTAGCCTATGCAATATGATAATGGGACTGACCCTTATTACTCTGTGCACCTGGGCATACATCCGGTACTCTGGAGAATACCGAGAGCTGGGTGCTGTAATAGACCAAGGAAGTACAAATGAGGCTTTATACAAGCTTTATAGTGCAGCAGCAACCCACAGACATCTGTATCATCAAGCTTTTCCTGCACCAAAGTCAGAATCTACTGAACAATCAGAAAAGAAGAAAATTTAA

Related Sequences

bmy_06175T0 Protein

Length: 532 aa      View alignments
>bmy_06175T0
MAKNRRDRNSWGGFSEKGYEWSSEEEEPVKKAGPVQVLIVRDDHSFELDETALNRILLSEAIRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYKQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQSLIFLVRDWSFPYEFSYGADGGSEFLEKRLKVSGNQHEELQNVRKHIHSCFTKISCFLLPHPGLKVATNPNFDGKLKEIDEEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYHKKMEEICGGDKPFLAPNDLQTRHLELKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQGSTNEALYKLYSAAATHRHLYHQAFPAPKSESTEQSEKKKI*