Part of scaffold_227 (Scaffold)

For more information consult the page for scaffold_227 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMX1 ENSTTRG00000006948 (Bottlenosed dolphin)

Gene Details

thioredoxin-related transmembrane protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006576, Bottlenosed dolphin)

Protein Percentage 97.11%
cDNA percentage 98.56%
Ka/Ks Ratio 0.72183 (Ka = 0.0135, Ks = 0.0186)

TMX1 ENSBTAG00000011225 (Cow)

Gene Details

Thioredoxin-related transmembrane protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014908, Cow)

Protein Percentage 93.17%
cDNA percentage 94.24%
Ka/Ks Ratio 0.23415 (Ka = 0.034, Ks = 0.1454)

TMX1  (Minke Whale)

Gene Details

thioredoxin-related transmembrane protein 1

External Links

Gene match (Identifier: BACU015335, Minke Whale)

Protein Percentage 97.91%
cDNA percentage 99.13%
Ka/Ks Ratio 1.40994 (Ka = 0.0096, Ks = 0.0068)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 936 bp    Location:1496665..1510541   Strand:+
>bmy_06187
ATGCGCACGGGCCGATCAGCCTGCGCGGGCGGAAGTGAGGAGGCGCTGCGCGGAGTGAGGGCTGCTGCGTTTGCTGTGGGTGGGCGAGCGGCCGACATGGCGCCCTCCCGGAGTCTCAGGATCCCCGTGGCAGTGCTGCTGCTGTTGCTTTGGGGGGCTCCCTGGACCCACGGGCGGCGGAGCGACGTGCGGATCATCACGGACGAGAACTGGAGAGAGTTGCTGGAAGGAGAGTGGATGATAGAATTTTATGCTCCATGGTGTCCTGCTTGTCAGAATCTTCAACCAGAATGGGAAAGTTTTGCCGAATGGGGAGAAGATCTTGAGGTTAATGTTGCAAAAGTGGATGTCACAGAGCAGCCAGGACTAAGCGGACGATTTATCATAACTGCTCTTCCTACTATTTATCATTGTAAAAATGGTGAATTTAGGCGCTATCAGGGCTCAAGGACTAAGAAGGACTTCATAAACTTTATAAGTGAAAAAGAGTGGAAGAGTATTGAACCCGTTTCATCATGGCTTGGTCCAGGTTCTGTTTTGATGAGTAGTATGTCAGCACTCTTTCAGCTGTCTATGTGGATCAGGACTTGCCATAACTATTTTATTGAAGACCTTGGATTACCGGTTTGGGGATCATATACAGTGTTTGCCTTAGCAACTCTGCTTTCGGGACTATTATTAGGACTTTGCATGATATTTGTGGCAGATTGCCTTTGTCCTTCAAAAAGGCGCAGACCACAGCCATACCCTTCCAAAAAATTATTACTAGAATCTTCTCAACCTCTGAAAAAAGTGGAGGAAGAACAAGAGGCTGATGAAGAAGATGTTTCAGAAGAGGAACCTGAAAGCAAAGAAAGAATAAACACAGACTTTGCACAGAATGCCATAAGACAACGTTCTGTGGCTCCTTCATTGGCCACAGATAAATCTAGTTAA

Related Sequences

bmy_06187T0 Protein

Length: 312 aa      View alignments
>bmy_06187T0
MRTGRSACAGGSEEALRGVRAAAFAVGGRAADMAPSRSLRIPVAVLLLLLWGAPWTHGRRSDVRIITDENWRELLEGEWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNVAKVDVTEQPGLSGRFIITALPTIYHCKNGEFRRYQGSRTKKDFINFISEKEWKSIEPVSSWLGPGSVLMSSMSALFQLSMWIRTCHNYFIEDLGLPVWGSYTVFALATLLSGLLLGLCMIFVADCLCPSKRRRPQPYPSKKLLLESSQPLKKVEEEQEADEEDVSEEEPESKERINTDFAQNAIRQRSVAPSLATDKSS*