Part of scaffold_238 (Scaffold)

For more information consult the page for scaffold_238 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LARP1 ENSTTRG00000015934 (Bottlenosed dolphin)

Gene Details

La ribonucleoprotein domain family, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015101, Bottlenosed dolphin)

Protein Percentage 99.11%
cDNA percentage 98.36%
Ka/Ks Ratio 0.14899 (Ka = 0.0075, Ks = 0.0501)

LARP1 ENSBTAG00000008443 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011109, Cow)

Protein Percentage 98.1%
cDNA percentage 95.04%
Ka/Ks Ratio 0.05705 (Ka = 0.0108, Ks = 0.1885)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2835 bp    Location:1267830..1301318   Strand:+
>bmy_06208
ATGGTGCTAGGAGGGGTGAGGACACTCACACAGCCAGGATCAGAACATGCTGCTCCGGCCAAGGTGGTGAGGGCAGCAGTTCCTAAACAGCGCAAAGGTAGCAAGGTTGGTGACTTTGGAGATGCAATCAACTGGCCAACACCTGGAGAGATAGCCCACAAGAGTGTGCAGCCACAGTCCCACAAGTCTCAGCCTGCCCGCAAGCTGCCACCCAAAAAGGACATGAAGGAACAGGAGAAAGGAGAGGGGAGTGATAGTAAGGAGAGCCCGAAAACCAAATCAGATGAATCGGGGGAGGAGAAGAATGGGGACGAGGACTACCAGCGAGGCGGGCAGAAGAAGAAAGGGAACAAACACAAGTGGGTTCCGTTGCAAATAGACATGAAGCCTGAAGTGCCCAGAGAGAAACTGGTCTCTCGCCCTACTCGCCCGCCGGAGCCACGACACACACCTGCCAACCGCGGGGAGATCAAAGGGTCTGAGCCTGCCACCTACGTGCCCGTGCCCGTGGCCCCCCCCACCCCAGCCTGGCAAGCAGAGACCAAATCGGAGCCTGCCTGGCACGACCAGGATGAGACATCGAGTGTGAAGAGTGATGGGGCTGGTGGGGCGCGGGCTTCCTTCCGTGGCCGTGGACGGGGGCGTGGTCGCGGCCGGGGACGCGGCCGGGGTGGCACTCGAACCCATTTTGACTACCAGTTTGGCTACCGAAAGTTTGATGGTGCAGAGGGGCCGCGCACCCCCAAGTACATGAACAACATCACCTACTACTTTGACAATGTCAGCAGCACTGAGCTTTACAGCGTGGACCAGGAGCTGCTTAAAGACTACATCAAGCGCCAGATTGAATACTACTTCAGCGTGGACAATTTAGAGCGAGACTTCTTCCTGCGACGGAAAATGGATGCTGACGGTTTCCTTCCCATCACACTTATTGCGTCCTTCCACCGAGTACAGGCCCTTACCACTGACATTTCACTCATTTTTGCGGCCCTAAAGGACAGCAAGGTGGTGGAGATCGTTGATGAAAAAGTCCGCCGGAGGGAGGAGCCAGAGAAATGGCCTCTTCCTGGTCCCCCAATAGTGGATTATTCCCAGACTGATTTCTCCCAGCTTCTCAACTGCCCAGAGTTTGTCCCCCGCCAGCACTATCAGAAGGAGACAGGTCGGTACCCTGCTGGCATGTGGATGCCTCCCTGTTGCCCTTGTCCTCTGGCCATCAGGAGGAGGGCTGGAGGGATGAGGATCTCCCCTTTCCACCCTTTAGAGTCGGCGCCTGGCTCTCCCCGTGCTGTCACCCCAGTGCCAACTAAAACAGAGGAGGTCAGCAACCTAAAGACCCTGCCCAAGGGCCTGTCTGCCAGCCTCCCTGACCTGGATTCTGAGAACTGGATTGAAGTGAAGAAAAGACCTCGGCCCTCCCCAGCACGACCCAAGAAGTCAGAGGAGCCCAGGTTCCTCCACCCGACCACTCTGCCTCAGCAGCTGCCCTCTCAGCAGCTGATGTCCAAGGATCAAGACGAGCAAGAGGAACTGGATTTCCTGTTTGACGAGGAGATGGAGCAGATGGATGGGCGGAAGAACACCTTTACCGCCTGGTCTGATGAGGACTCTGACTACGAGATTGATGACCGGGATGTCAACAAGATCCTCATTGTCACCCAGACACCACCTTACATGCGCCGGCACCCGGGGGGGGACCGCACAGGCAACCACACCTCGCGTGCCAAGATGAGCGCTGAGCTGGCCAAGGTCATTAACGACGGGCTCTTCTACTACGAGCAGGACCTGTGGACTGAGAAGTTTGAACCCGAGTATTCCCAGATCAAGCAAGAAGTCGAGAACTTCAAGAAAGTCAACATGATCAGTCGGGAGCAGTTTGACACACTAACCCCTGAGCCCCCTGTGGATCCCAACCAAGAGGTCCCTCCTGGACCACCTCGCTTCCAGCAAGTTCCCACTGACGCCCTGGCCAACAAGCTGTTCGGTGCCCCCGAGCCCTCCACCATTGCCCGCTCTCTACCAACCACTGTCCCAGAGTCGCCAAACTATCGCAACGCCAGGACCCCTCGCACTCCCCGGACACCGCAGCTCAAAGACTCAAGCCAGACGTCACGGTTTTATCCAGTGGTGAAGGAAGGTCGGACGCTAGATGCTAAGATGCCTCGGAAAAGGAAGACCAGACACAGCTCGAACCCACCCTTGGAGAGTCACGTGGGCTGGGTGATGGATTCCCGCGAGCACAGGCCCCGGACTGCTTCCATCAGCTCCAGCCCCTCAGAAGGCACGCCTGCGGTTGGCAGCTATGGCTGTACCCCTCAATCTCTGCCCAAGTTCCAGCATCCTTCCCACGAGCTGCTCAAGGAAAACGGCTTCACACAACACGTCTACCACAAGTATCGTAGGCGCTGCCTTAACGAGCGGAAACGCTTGGGCATTGGCCAGTCTCAGGAGATGAACACTCTCTTCCGCTTCTGGTCCTTCTTCCTCCGAGATCACTTCAACAAAAAGATGTATGAGGAGTTCAAGCAGCTGGCTCTGGAGGATGCCAAAGAAGGCTACAGATATGGTTTGGAGTGCCTTTTTCGATACTACAGTTATGGCCTGGAAAAGAAGTTCAGGCTGGACATATTTAAGGACTTTCAGGAGGAAACCGTGAAGGACTATGAAGCTGGTCAGCTGTATGGGCTGGAGAAGTTCTGGGCCTTCTTGAAATATTCCAAAGCCAAAAATTTGGACATTGACCCCAAACTTCAAGAATACCTCGGCAAATTCCGACGTCTTGAAGACTTCCGAGTGGATGTGAGTGGATGTCTCTCGTCTTTCCCRCCCTGA

Related Sequences

bmy_06208T0 Protein

Length: 945 aa      View alignments
>bmy_06208T0
MVLGGVRTLTQPGSEHAAPAKVVRAAVPKQRKGSKVGDFGDAINWPTPGEIAHKSVQPQSHKSQPARKLPPKKDMKEQEKGEGSDSKESPKTKSDESGEEKNGDEDYQRGGQKKKGNKHKWVPLQIDMKPEVPREKLVSRPTRPPEPRHTPANRGEIKGSEPATYVPVPVAPPTPAWQAETKSEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRGGTRTHFDYQFGYRKFDGAEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKWPLPGPPIVDYSQTDFSQLLNCPEFVPRQHYQKETGRYPAGMWMPPCCPCPLAIRRRAGGMRISPFHPLESAPGSPRAVTPVPTKTEEVSNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEEPRFLHPTTLPQQLPSQQLMSKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEDSDYEIDDRDVNKILIVTQTPPYMRRHPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWTEKFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDVSGCLSSFPP*