Part of scaffold_233 (Scaffold)

For more information consult the page for scaffold_233 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCP2 ENSTTRG00000002180 (Bottlenosed dolphin)

Gene Details

lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002044, Bottlenosed dolphin)

Protein Percentage 89.63%
cDNA percentage 91.73%
Ka/Ks Ratio 0.59268 (Ka = 0.0762, Ks = 0.1286)

BT.74007 ENSBTAG00000009381 (Cow)

Gene Details

lymphocyte cytosolic protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012345, Cow)

Protein Percentage 81.16%
cDNA percentage 85.17%
Ka/Ks Ratio 0.50945 (Ka = 0.1362, Ks = 0.2673)

LCP2  (Minke Whale)

Gene Details

lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)

External Links

Gene match (Identifier: BACU003686, Minke Whale)

Protein Percentage 86.18%
cDNA percentage 88.13%
Ka/Ks Ratio 0.43798 (Ka = 0.1032, Ks = 0.2357)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location:1249891..1202552   Strand:-
>bmy_06219
ATGGCATTCAGGAACGTGCCCTTTCGCTCCGAGGTCCTGGCCTGGGACCCTGACACCCTTGCAGACTATTTCAAGAAGCTGAACTACAAGGACTGTGAAAAGGCTGTGAAGAAATATCACATCGACGGGCCGCGGTTTTTGAACCTGGCAGAGAATGACATCCAGAAGTTCCCTAAGCTCCGGGTGCCGATTCTCAGTAAGTTAAGTCAAGAAATCAACAAGAATGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAAGTCCAGCGGTTTCCTGAGGAAACAGATGACTATGAAAGTCCCGATGATGATCAGGATGGGGAGGATGACGGTGACTATGAGTCCCCCAATGAAGAGGAAGAGGCACCCATGGAAGACGACGCCGATTATGAGCCGCCACCCTCCAACGATGAGGAGGCTCTGCAGAACTCCATCCTGCCTGCAAAGCCTTTCTCCAACCCCAGCTCCACGTACATAGACCGGCCCCACTCCGGGAAAGTGCAGCAGCCGCCCGTGCCCCCGCAGAGGCCGATGGCCGCCATCCTTCCTTTGCCCGCTGGTGGCCGGGCTCATTCGGTAGGCTCCATACTTTCTGTTATGCCACTTTGTGTCCACTCGATGATTTCCTCTGCAGAGAGAAAAAACTACAGACATCTTTATGCAATTCTAGCCAGAAAGAAACCAGCGATTTCTGACAAGCTCTCCGCCCCAGCGGGAAGGCCTCTCGGGGAGCATTTACCCAAGATACAAAAGCCCCCGTTGCCACCAGCCATGGAAAGGCACGACAGAAGCAGCCCCCTGCCAGGGAAGAAGCCACCTGTGCCAAAGCATGCATGGGGATCAGACAGAAGAGAGAATGTAAGTACAAAATGTCATGTGGTGAATGCTTGGCACAGGGAAACCGGTGATGAAGATGATGTACATCAGAGATCTCTGCCCCAGCCAGCACTGTTCCCCATGAGCTCCAACACCTTCCCTTCAAGATCTACCAAGCCATCGCCCAAGCACTCCCTCCCATCAGCTCACCTGCCCGGAGCCTTCTCAGAAAGCAACAGTAGTTTTTCGCAGAGTGCCTCCCTGCCGCCATACTTCTCTCAAGGCCCTAGCAACAGGCCACCTCCCAGAGTTGAAGGCAGGAGCTTTCCCTCGCCAGCTCCAAACAAACCTCAGCTACCATCCCCTTCGGAAGAAGAGAATTCATTAAATGAAGACTGGTACGTTTCTTATATTACCCGAATAGAGGCAGAAGCGGCTCTTAGAAAGATAAACCAGGATGGCACTTTCCTGGTTAGAGACAGCTCTAGAAAAACAATAACCAATCCATATGTCCTCATGGTGTTGTACAAAGATAAAGTTTACAACATCCAGATCCGTTATCAGGAGGAAAGCCAAGTTTACTTGTTGGGAACTGGACTCCGAGGGAAAGAGGACTTTCTGTCTGTGTCCGATATTATCGACTACTTCAGGAAAATGCCACTTCTGCTCATTGATGGGAAGAACCGAGGCTCCAGATACCAGTGCACATTAACGTATTCCGCAGGTTATCCCTAG

Related Sequences

bmy_06219T0 Protein

Length: 517 aa      View alignments
>bmy_06219T0
MAFRNVPFRSEVLAWDPDTLADYFKKLNYKDCEKAVKKYHIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETDDYESPDDDQDGEDDGDYESPNEEEEAPMEDDADYEPPPSNDEEALQNSILPAKPFSNPSSTYIDRPHSGKVQQPPVPPQRPMAAILPLPAGGRAHSVGSILSVMPLCVHSMISSAERKNYRHLYAILARKKPAISDKLSAPAGRPLGEHLPKIQKPPLPPAMERHDRSSPLPGKKPPVPKHAWGSDRRENVSTKCHVVNAWHRETGDEDDVHQRSLPQPALFPMSSNTFPSRSTKPSPKHSLPSAHLPGAFSESNSSFSQSASLPPYFSQGPSNRPPPRVEGRSFPSPAPNKPQLPSPSEEENSLNEDWYVSYITRIEAEAALRKINQDGTFLVRDSSRKTITNPYVLMVLYKDKVYNIQIRYQEESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTYSAGYP*