Part of scaffold_236 (Scaffold)

For more information consult the page for scaffold_236 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GCA ENSTTRG00000005990 (Bottlenosed dolphin)

Gene Details

grancalcin, EF-hand calcium binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005664, Bottlenosed dolphin)

Protein Percentage 82.12%
cDNA percentage 86.03%
Ka/Ks Ratio 0.63492 (Ka = 0.1005, Ks = 0.1582)

GCA ENSBTAG00000018446 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024550, Cow)

Protein Percentage 78.89%
cDNA percentage 85.26%
Ka/Ks Ratio 0.48617 (Ka = 0.1392, Ks = 0.2863)

GCA  (Minke Whale)

Gene Details

grancalcin, EF-hand calcium binding protein

External Links

Gene match (Identifier: BACU019092, Minke Whale)

Protein Percentage 88.33%
cDNA percentage 92.04%
Ka/Ks Ratio 0.76951 (Ka = 0.0816, Ks = 0.106)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 651 bp    Location:1354172..1326048   Strand:-
>bmy_06225
ATGGCCTACCCGGGATACGGAGGAGGGTTTGGAAATTTTAGCAATCAGATGCAAATGGGACAGCCAGTGCCAGGAACAGGGCCAGCTGTGCTCCCTGGTGGATACCCTGCATGCCCAGCTTATCCGGACAGTTATTCCTCAGCGGGAGACTCCATGTGGACATACTTCACTGCTGTTGCTGACCAGGATGGTGAAGTGGATGCTGAAGAACTTCAGAAATGTTTAACACAGTCTGGAATTAGTGGAACTTTTTCTCCCTTCAGTTTGGAAACCTGCAGAATTATGATTGCCATGTTGGATAGAGATTACACAGGAAAAATGGGATTTAATGAATTCAAAGAACTTTGGGCAGCTCTTAATGCCTGGAAGCAAAATTTCATAACTGTTGATAAAGACGGAAGTGGCGCAGTAGAGCATCATGAATTGAATCAAGCCATTGCTGCTATGGGTTATAGGTTGAGTCCTCAAACATTAACTGCTATCGTTAAACGTTATAGCAAGAATGGCAGAATTTTCTTTGATGATTATGTTGCTTGCTGTGTGAAGCTTCGAGCATTGACAGGTATGGACCATTTATGGGTTGAAGGCAAAAAGCATTATGTTAGTGCTTTTAATTACCTAGAAGGAGAGCAGTTGCTATACTGCTGTTAA

Related Sequences

bmy_06225T0 Protein

Length: 217 aa      View alignments
>bmy_06225T0
MAYPGYGGGFGNFSNQMQMGQPVPGTGPAVLPGGYPACPAYPDSYSSAGDSMWTYFTAVADQDGEVDAEELQKCLTQSGISGTFSPFSLETCRIMIAMLDRDYTGKMGFNEFKELWAALNAWKQNFITVDKDGSGAVEHHELNQAIAAMGYRLSPQTLTAIVKRYSKNGRIFFDDYVACCVKLRALTGMDHLWVEGKKHYVSAFNYLEGEQLLYCC*