Part of scaffold_236 (SequenceType object (1))

For more information consult the page for scaffold_236 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFIH1ENSTTRG00000013780 (Bottlenosed dolphin)

Gene Details

interferon induced with helicase C domain 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013071, Bottlenosed dolphin)

Protein Percentage 88.2%
cDNA percentage 90.26%
Ka/Ks Ratio 0.56652 (Ka = 0.0242, Ks = 0.0427)

IFIH1ENSBTAG00000008142 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010703, Cow)

Protein Percentage 90.42%
cDNA percentage 93.33%
Ka/Ks Ratio 0.31276 (Ka = 0.0466, Ks = 0.1489)

IFIH1 (Minke Whale)

Gene Details

interferon induced with helicase C domain 1

External Links

Gene match (Identifier: BACU010080, Minke Whale)

Protein Percentage 98.17%
cDNA percentage 98.87%
Ka/Ks Ratio 0.46776 (Ka = 0.0078, Ks = 0.0166)

Genome Location

Sequence SequenceType object (2)

Length: 2136 bp    Location:1409869..1438830   Strand:+
>bmy_06227
ATGGGCAGTGATTCAGGCACCATGGGAAGTGATTCAGATGAAGAGAATGCGGTACAGAGAGCATCCCCTGAGCCAGAAATGCATCTCAGGCCTTACCAACTGGAAGTGGCCCAGCCAGCCTTGGAGGGGAAGAATATCATTATATGCCTCCCTACAGGGAGTGGGAAAACCAGAGTGGCCGCTTACATTGCCAAGGATCACTTGGACAAGAAGAAAAAAGCATCTGAACTTGGAAAAGTTATGGTCCTTGTCAATAAGGTACCATTAGTTGAACAGCTCTTCCGCAAAGAGTTCGAACCATTTTTGAAGAAATGGTATCATGTTACTGGATTAAGTGGTGATACCCAATTGAAAATAACATTTCCAGAAGTTGTCAAGTCTCATGATGTTATTATCAGTACAGCTCAAATCCTTGAAAACTCCCTTTTAAACTTAGAAGAAGGCAAAGATGATGGTGTACAGTTGTCAGACTTTTCTCTCATCATTATTGATGAATGCCATCACACCAACAAAGAAGCAGTCTATAATAACATCATGAGGCGTTATTTGAACCAGAAGTTGAAAAACAATAGACTTGAGAAAAAAAACAAACCGGTGATTCCCTTACCTCAGATACTGGGACTAACAGCRTCACCAGGTGTTGGAGCGGCCAAAAAGCAAGCCAAAGCTGAAGAACACATTTTAAAAATATGTGCCAATCTTGATGCATTTACCATTAAAACCGTGAAAGAAAATACTAATCAACTTAAAGACCAAATAAAGGAGCCATGTAAAAAGTTCGTAATCGCAGATGACGCCAAAGAAGATCCATTTAAAGATAAACTTCTAGAAATAATGACAAAGATTCAAACTTTTTGCCAAATTAGTCCAATGTCAGATTTTGGAACTCAACCCTATGAACAATGGCTCATTCAAATGGAAAAAAAAGCTGCAAGAGAAGGAAATCGCAAAGATCGTGTTTGTGCAGAACATCTGAGGAAGTACAATGAGGCCCTACAAATTAATAATACAATCCGAATGATTGATGCATATAATCACCTTGAAACTTTCTACAATGATGAGAAAGAAAAGAAGTTTGCAGTCCTAGGAGATGACAGTGATGAGAGTGATGATGATGGTGATGATGAAGATGCAGGTGATGAAAAGAAACCTTTGAAGCTGGATGAGTCAGATGGATTTCTCATGACTTTATTTTTGGAACATGAAAATGAAAAGCTGACCAAATTGAGAAACACCATAATGGAACAATATACAAGGGCCGAGGAATCCGCACGAGGAATAATTTTCACGAAAACACGACAAAGTGCATATGCCCTTTCCCAGTGGATTACTGAAAATGAAAAATTTGCAGAAGTAGGAGTCAAAGCCCACCATCTGATTGGAGCTGGACACAGCAGTGAGTTCAAGCCCATGACACAGAATGAACAAAAAGAAGTCATTAGTAAATTTCGCACGGGAAAAATAAATCTGCTTATCGCTACCACAGTGGCAGAAGAAGGTCTGGATATTAAAGAATGTAATATCGTTATCCGTTATGGTCTCGTCACTAACGAAATAGCCATGGTCCAGGCCCGTGGGCGAGCCAGAGCTGACGAGAGCACCTACGTCCTGGTTGCCCAAAGAGGCTCAGGAGTTATTGAACGTGAGGCAGTTAATGATTTCCGAGAGACGATGATGTATAAAGCTATAGACCGTGTTCAGAATATGAAACCAGAGGAGTACAATCATAAGATTTTGGAATTACAGATGCAAAGTATATTGGAAAAGAAAATGAAAATCAAGAGAAGTATTGCAAAGCAGTTCAAGGACAACCCATCATTAATAAGWTTTCTCTGTAAAAACTGTAGTGTGCTAGCCTGCTCTGGAGAAGATATCCACGTAATTGAAAAGATGCACCATGTCAATATGACACCAGAGTTCAAGAAACTGTACATTGTGAGAGGAAACAAAGCACTGCAAACAAAGTTTGCTGACTATCAAACAAATGGAGAGATAATCTGCAAAGAATGTGGCCAAAATTTTGTAGTGGTTTTCAAAAATAATTTACCAAAGAAGCAATACAAAAAGTGGGTAGAATTACCAATGACATTTCCCGATCTTAACTATTCWGAATATTGTTTGTTTAGTGATGAAGAT

Related Sequences

bmy_06227T0 SequenceType object (3)

Length: 712 aa      View alignments
>bmy_06227T0
MGSDSGTMGSDSDEENAVQRASPEPEMHLRPYQLEVAQPALEGKNIIICLPTGSGKTRVAAYIAKDHLDKKKKASELGKVMVLVNKVPLVEQLFRKEFEPFLKKWYHVTGLSGDTQLKITFPEVVKSHDVIISTAQILENSLLNLEEGKDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLNQKLKNNRLEKKNKPVIPLPQILGLTASPGVGAAKKQAKAEEHILKICANLDAFTIKTVKENTNQLKDQIKEPCKKFVIADDAKEDPFKDKLLEIMTKIQTFCQISPMSDFGTQPYEQWLIQMEKKAAREGNRKDRVCAEHLRKYNEALQINNTIRMIDAYNHLETFYNDEKEKKFAVLGDDSDESDDDGDDEDAGDEKKPLKLDESDGFLMTLFLEHENEKLTKLRNTIMEQYTRAEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAQRGSGVIEREAVNDFRETMMYKAIDRVQNMKPEEYNHKILELQMQSILEKKMKIKRSIAKQFKDNPSLIXFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKKLYIVRGNKALQTKFADYQTNGEIICKECGQNFVVVFKNNLPKKQYKKWVELPMTFPDLNYSEYCLFSDED