Part of scaffold_239 (Scaffold)

For more information consult the page for scaffold_239 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC35C2 ENSTTRG00000006176 (Bottlenosed dolphin)

Gene Details

solute carrier family 35 (GDP-fucose transporter), member C2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005842, Bottlenosed dolphin)

Protein Percentage 85.99%
cDNA percentage 88.06%
Ka/Ks Ratio 0.4763 (Ka = 0.1086, Ks = 0.228)

SLC35C2 ENSBTAG00000003635 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038994, Cow)

Protein Percentage 84.17%
cDNA percentage 83.93%
Ka/Ks Ratio 0.18907 (Ka = 0.1063, Ks = 0.5624)

SLC35C2  (Minke Whale)

Gene Details

solute carrier family 35 (GDP-fucose transporter), member C2

External Links

Gene match (Identifier: BACU011367, Minke Whale)

Protein Percentage 89.58%
cDNA percentage 91.1%
Ka/Ks Ratio 0.35012 (Ka = 0.0698, Ks = 0.1995)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 924 bp    Location:846844..859829   Strand:+
>bmy_06245
ATGACTCAGGCCGCCTTCCTTTGGTCTTTGTATCCAGATTGCCCTGCTGCCCTCAGGGAAGTCAGGGGTCTCCCCCTGACCCTTCCCAGCCCACTGATTGCGCTGTGGGTCCGCGCCCCCAGCTCCAGCGGTATGTCATGGGTAATCTTCCCTCGCAGGTACACGATGACCAAATCCTCGGCTGTCCTCTTCATCCTGATCTTCTCTCTGATCTTCAAGCTGGAGGAGCTGCGTGCGGCGCTGGTCTTGGTGGTTCTTCTCATCGCCGGGGGCCTCTTCATGTTCACCTACAAGTCCACACAGTTCAACGCTGAGGGCTTTGCCTTGGTGCTGGGTGCCTCGTTCATCGGGGGTATTCGCTGGACACTCACCCAGATGCTCCTGCAAAAGGCGGAACTTGGGCTCCAGAACCCCATCGACACCATGTTCCACCTGCAGCCACTCATGTTTCTGGGGCTCTTCCCTCTCTTTGCCGTATTTGAAGGTCTCCATTTGTCCACATCTGAGAAGATCTTCCGTTTCCAGGACACAGGGCTGCTCCTGCGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTGGTCTCCAGAACCTCCAGCCTCACTCTCTCCATTGCTGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCTGCTGGGCGATCAGATCAGTCTCTTGAACTGGCTGGGCTTCGCCCTCTGCCTCTCGGGAATATCCCTGCACATCGCCCTCAAAGCCCTGCATTCCAGAGGTGACAGCGGCCCTAAGCCCCTGAAGGGGCTGGGCTCCAACCCCGACCTGGAGCTACTGCTCCGGACCAGCCAGCCGGAGGAAAAGGACAACGAGGAGGAGGAGGGGTACTTTGTGGCCCAGGGGCAGCAGTGA

Related Sequences

bmy_06245T0 Protein

Length: 308 aa      View alignments
>bmy_06245T0
MTQAAFLWSLYPDCPAALREVRGLPLTLPSPLIALWVRAPSSSGMSWVIFPRRYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNAEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHIALKALHSRGDSGPKPLKGLGSNPDLELLLRTSQPEEKDNEEEEGYFVAQGQQ*