Part of scaffold_239 (Scaffold)

For more information consult the page for scaffold_239 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLTP ENSTTRG00000016010 (Bottlenosed dolphin)

Gene Details

phospholipid transfer protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015173, Bottlenosed dolphin)

Protein Percentage 87.81%
cDNA percentage 90.74%
Ka/Ks Ratio 0.42782 (Ka = 0.0799, Ks = 0.1867)

PLTP ENSBTAG00000000559 (Cow)

Gene Details

phospholipid transfer protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000732, Cow)

Protein Percentage 81.0%
cDNA percentage 85.01%
Ka/Ks Ratio 0.28183 (Ka = 0.1188, Ks = 0.4215)

PLTP  (Minke Whale)

Gene Details

phospholipid transfer protein

External Links

Gene match (Identifier: BACU011374, Minke Whale)

Protein Percentage 89.64%
cDNA percentage 92.57%
Ka/Ks Ratio 0.5371 (Ka = 0.0669, Ks = 0.1246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1461 bp    Location:1249976..1259233   Strand:+
>bmy_06254
AAGCTTAACGATCACGGCCAGCCGCTCTTTTGGTTGGCCATCCGAGGAGTGGGTTTTAGAGGCCCGGATGACTCCCGCGATCCCACCCCACCCCCAGGCCCGCTCGCCATGGCCCTCTTCGGGGCCCTGTTTCTAGCGCTGCTGGCAGGCGCTCAGGCCGAGCTCCCCGGCTGCAAGATCCGCATCACCTCCAAGGCGCTTGAGCTAGTGAAGCAGGAGGGTTTGCGCTTTCTGGAGCAAGAGCTGGAGACCATCACCATTCCGGACCTGCGGGGCCGAGAGGGCCACTTCTACTACAATATCTCTGAGGTGAAGGTCATGGAGCTGCAGCTGACATCCTCTGAGCTCCATTTCCAGCCAGAGCAGGAGCTGATGCTACAGATCAACAATGGCTCCTTGGGGCTGCGCTTCCGGAGACAGCTCCTCTACTGGTTCTTCTACGATGGGGGATATATCAACGCCTCCGCCGAGGGTGTGTCCATCCACACCGCTCTGCAGCTCTCCCGGGATCCCACTGGCCGGATCAAAGTGTCCAACGTCTCCTGCCAGGCCTCTGTCTCCAGAATGCATGCAGCCTTTGGCGGAACCTTCAAGAAGGTGTATGAATTTCTCTCCATGTTCATCACCTCGGGGATGCACTTCCTCCTCAACCAGCAGGGGGCCTTCTTTCCCCTGGCCGATGGCAACTGGAGCCTGCGCAATCAGGCGGTGGAGCCCCAGCTGCCCGAGGAAGAGCGGATGGTATACGTGGCCTTCTCTGAGTTCTTCTTCGACTCTGCCATGGAGAGCTACTTCCGGGCAGGGGCCCTGAAGCTGTCGCTGCTGGGGGCCAAGGTGCCCCATGATCTGGACATGCTGCTGAGGACCACCTACTTTGGGAACATCGTCCTGCTGAGCCCGGCAGAGATCGACTCTCCGCTGAAGCTGGAGCTGCGGGTCACGGCGCCACCACGCTGCACCATCAAGCCCTCAGGCACCACCATCTCTGTCACTGCCAGTGTCACCATCGCCCTGGTCCCACCCAACCAGCCCGAGGTCAAGCTGTTCCGAATCTACTCAAACCAGTCTGCATTAGAGTCGCTGGCAGTGAGCTGGGAATGGGGGGGTGGGCCAGGGCTGGGGTTGAGGTGGGCAGTGAAGGCGAGCCCACCCTCTACGGGATGCCCTGACTTCCTCCCTCCTCCCTCCCAGCTGATCCCACTGCAGGCCCCTCTGAAGACCATGCTGCAGATCGGGGTGATGCCCATGCTCAATGAGCGGACCTGGCGTGGGGTGCAGATCCCACTCCCTGAGGGTATTGACTTCGTGCGCGAGGTGGTGACAAACCACGTGGGTTTCCTCACCATCGGGGCTGACCTCCACTTTGCCAAAGGGCTGCGAGAGGTGATTGAGAAGAACCGGCCTGCCAACACCAGGGACCCCCGAGCACCCAGTGCCCCGCCACCCTCCATGGCAGCTGTC

Related Sequences

bmy_06254T0 Protein

Length: 487 aa      View alignments
>bmy_06254T0
KLNDHGQPLFWLAIRGVGFRGPDDSRDPTPPPGPLAMALFGALFLALLAGAQAELPGCKIRITSKALELVKQEGLRFLEQELETITIPDLRGREGHFYYNISEVKVMELQLTSSELHFQPEQELMLQINNGSLGLRFRRQLLYWFFYDGGYINASAEGVSIHTALQLSRDPTGRIKVSNVSCQASVSRMHAAFGGTFKKVYEFLSMFITSGMHFLLNQQGAFFPLADGNWSLRNQAVEPQLPEEERMVYVAFSEFFFDSAMESYFRAGALKLSLLGAKVPHDLDMLLRTTYFGNIVLLSPAEIDSPLKLELRVTAPPRCTIKPSGTTISVTASVTIALVPPNQPEVKLFRIYSNQSALESLAVSWEWGGGPGLGLRWAVKASPPSTGCPDFLPPPSQLIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGIDFVREVVTNHVGFLTIGADLHFAKGLREVIEKNRPANTRDPRAPSAPPPSMAAV