Part of scaffold_239 (SequenceType object (1))

For more information consult the page for scaffold_239 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLTPENSTTRG00000016010 (Bottlenosed dolphin)

Gene Details

phospholipid transfer protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015173, Bottlenosed dolphin)

Protein Percentage 87.81%
cDNA percentage 90.74%
Ka/Ks Ratio 0.42782 (Ka = 0.0799, Ks = 0.1867)

PLTPENSBTAG00000000559 (Cow)

Gene Details

phospholipid transfer protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000732, Cow)

Protein Percentage 81.0%
cDNA percentage 85.01%
Ka/Ks Ratio 0.28183 (Ka = 0.1188, Ks = 0.4215)

PLTP (Minke Whale)

Gene Details

phospholipid transfer protein

External Links

Gene match (Identifier: BACU011374, Minke Whale)

Protein Percentage 89.64%
cDNA percentage 92.57%
Ka/Ks Ratio 0.5371 (Ka = 0.0669, Ks = 0.1246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1461 bp    Location:1249976..1259233   Strand:+
>bmy_06254
AAGCTTAACGATCACGGCCAGCCGCTCTTTTGGTTGGCCATCCGAGGAGTGGGTTTTAGAGGCCCGGATGACTCCCGCGATCCCACCCCACCCCCAGGCCCGCTCGCCATGGCCCTCTTCGGGGCCCTGTTTCTAGCGCTGCTGGCAGGCGCTCAGGCCGAGCTCCCCGGCTGCAAGATCCGCATCACCTCCAAGGCGCTTGAGCTAGTGAAGCAGGAGGGTTTGCGCTTTCTGGAGCAAGAGCTGGAGACCATCACCATTCCGGACCTGCGGGGCCGAGAGGGCCACTTCTACTACAATATCTCTGAGGTGAAGGTCATGGAGCTGCAGCTGACATCCTCTGAGCTCCATTTCCAGCCAGAGCAGGAGCTGATGCTACAGATCAACAATGGCTCCTTGGGGCTGCGCTTCCGGAGACAGCTCCTCTACTGGTTCTTCTACGATGGGGGATATATCAACGCCTCCGCCGAGGGTGTGTCCATCCACACCGCTCTGCAGCTCTCCCGGGATCCCACTGGCCGGATCAAAGTGTCCAACGTCTCCTGCCAGGCCTCTGTCTCCAGAATGCATGCAGCCTTTGGCGGAACCTTCAAGAAGGTGTATGAATTTCTCTCCATGTTCATCACCTCGGGGATGCACTTCCTCCTCAACCAGCAGGGGGCCTTCTTTCCCCTGGCCGATGGCAACTGGAGCCTGCGCAATCAGGCGGTGGAGCCCCAGCTGCCCGAGGAAGAGCGGATGGTATACGTGGCCTTCTCTGAGTTCTTCTTCGACTCTGCCATGGAGAGCTACTTCCGGGCAGGGGCCCTGAAGCTGTCGCTGCTGGGGGCCAAGGTGCCCCATGATCTGGACATGCTGCTGAGGACCACCTACTTTGGGAACATCGTCCTGCTGAGCCCGGCAGAGATCGACTCTCCGCTGAAGCTGGAGCTGCGGGTCACGGCGCCACCACGCTGCACCATCAAGCCCTCAGGCACCACCATCTCTGTCACTGCCAGTGTCACCATCGCCCTGGTCCCACCCAACCAGCCCGAGGTCAAGCTGTTCCGAATCTACTCAAACCAGTCTGCATTAGAGTCGCTGGCAGTGAGCTGGGAATGGGGGGGTGGGCCAGGGCTGGGGTTGAGGTGGGCAGTGAAGGCGAGCCCACCCTCTACGGGATGCCCTGACTTCCTCCCTCCTCCCTCCCAGCTGATCCCACTGCAGGCCCCTCTGAAGACCATGCTGCAGATCGGGGTGATGCCCATGCTCAATGAGCGGACCTGGCGTGGGGTGCAGATCCCACTCCCTGAGGGTATTGACTTCGTGCGCGAGGTGGTGACAAACCACGTGGGTTTCCTCACCATCGGGGCTGACCTCCACTTTGCCAAAGGGCTGCGAGAGGTGATTGAGAAGAACCGGCCTGCCAACACCAGGGACCCCCGAGCACCCAGTGCCCCGCCACCCTCCATGGCAGCTGTC

Related Sequences

bmy_06254T0 SequenceType object (3)

Length: 487 aa      View alignments
>bmy_06254T0
KLNDHGQPLFWLAIRGVGFRGPDDSRDPTPPPGPLAMALFGALFLALLAGAQAELPGCKIRITSKALELVKQEGLRFLEQELETITIPDLRGREGHFYYNISEVKVMELQLTSSELHFQPEQELMLQINNGSLGLRFRRQLLYWFFYDGGYINASAEGVSIHTALQLSRDPTGRIKVSNVSCQASVSRMHAAFGGTFKKVYEFLSMFITSGMHFLLNQQGAFFPLADGNWSLRNQAVEPQLPEEERMVYVAFSEFFFDSAMESYFRAGALKLSLLGAKVPHDLDMLLRTTYFGNIVLLSPAEIDSPLKLELRVTAPPRCTIKPSGTTISVTASVTIALVPPNQPEVKLFRIYSNQSALESLAVSWEWGGGPGLGLRWAVKASPPSTGCPDFLPPPSQLIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGIDFVREVVTNHVGFLTIGADLHFAKGLREVIEKNRPANTRDPRAPSAPPPSMAAV