Sequence detailsbmy_06257 (Coding sequence)

Part of scaffold_239 (SequenceType object (1))

For more information consult the page for scaffold_239 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA25ENSTTRG00000016001 (Bottlenosed dolphin)

Gene Details

spermatogenesis associated 25

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015163, Bottlenosed dolphin)

Protein Percentage 91.96%
cDNA percentage 92.29%
Ka/Ks Ratio 0.38056 (Ka = 0.0566, Ks = 0.1488)

SPATA25ENSBTAG00000000960 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001269, Cow)

Protein Percentage 79.05%
cDNA percentage 83.17%
Ka/Ks Ratio 0.48579 (Ka = 0.1547, Ks = 0.3184)

SPATA25 (Minke Whale)

Gene Details

spermatogenesis associated 25

External Links

Gene match (Identifier: BACU011376, Minke Whale)

Protein Percentage 98.45%
cDNA percentage 98.63%
Ka/Ks Ratio 0.28371 (Ka = 0.0077, Ks = 0.0272)

Additional orthologs identified in other species via the OPTIC pipeline.

SPATA25 (Human)   Spata25 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1143 bp    Location:1269265..1272101   Strand:+
Raw sequence 
>bmy_06257
ATGTCCTACTTCATGTCTCCACAAACTCATCCAGGTCTTCCGCCTTCCGGCCAAGGTGGGGCTGCTTCTCTGGGCTCATCCCTTGGCCTCTATAGTCCTGTAGAGCCAGTGGTGGTGGCCTCTGGTGGACAAGGCCCACTGAGCCAGAAAGCTGAGCAGGCGACACCCGTTGCCCAGGCCTGGGGCCCGGCCCTGGCAGTGCCAGAAGCCAGGGGCTGCCCTGGGGGGGCTAGCTGGGAGCCACTGCGGCGGAAGGAGTACAGCCGGTACTGCCACAAATTCCCCCACGCGAGGCAGCCGGAGAGCCTGGGCTGGGAGGATGGCTGCTCCAGAAGCAGAGCTCCCTACCTGGGTGGCCCCAGCAGGCCTGGGCCCCTGCTGTGTGGGCTGCCCTCTGAGGCAGGAGGGAAGGAGGCCGGCTCCCAGCCCGACATCTGCATTCTTACCTTGGCCATGATGATCGCTGGCATCCCCACCGTGCCTGTCCCAGGCCTACGGGAAGAGGACCTGATCCGGGCAGCTCAAGCTTTCATGATGGCCCATCCGGAGCCAGCGGGGGCTGTGGAGGGGGCACGGGCCGATCCAGCTGTCGGCCAGCTCGCGCAGGGTGCTGTACCGCCGTTCAAACTCCTCCTGACTGCAGTGCTGCAGGCGCTGACCCACCTCCTCTGTGAGGAGCGCCACGGCCAAGTGCTTATCCAGGGTCTCACTCCACTTGCTGCCCACGATGTCACCGAGGCTGGCAGCACAGCCTGCCGTCCACCCAGCTGGCAGCATGTCTGGCTGGAGCACCTGGCGGCGGGCACTGAGCATGGTGAGGATGTGGCGGCAGGGCAGACGGAAGGCCTGGTTAAAGTAGCAGCTGCAGCTGGTCGGGGTCTGGGGCTGCACCCTATGGGTGTCCTCCAGGATCTGTATGTTCACCTTTTCGGAACCAGAGCCGATGAGGTGCATGGATTTCTGGACCACGGCAAGCTCGCCCAGGCAGAGCTGGGCGGCCGGCCCCGTGCAGATGGCATTAAGGGAGTGCTGGATGCGGGCTTCTACCAACTGCTCCACTTTAGGGCTTTCGGGGCTGCCATCCAAAGGGGGATGATTGTTCGGGGGACTCAGGCCCAGGCTGAAACTCGCCTTGTCTCCTGA

Related Sequences

bmy_06257T0 SequenceType object (3)

Length: 381 aa      View alignments
>bmy_06257T0
MSYFMSPQTHPGLPPSGQGGAASLGSSLGLYSPVEPVVVASGGQGPLSQKAEQATPVAQAWGPALAVPEARGCPGGASWEPLRRKEYSRYCHKFPHARQPESLGWEDGCSRSRAPYLGGPSRPGPLLCGLPSEAGGKEAGSQPDICILTLAMMIAGIPTVPVPGLREEDLIRAAQAFMMAHPEPAGAVEGARADPAVGQLAQGAVPPFKLLLTAVLQALTHLLCEERHGQVLIQGLTPLAAHDVTEAGSTACRPPSWQHVWLEHLAAGTEHGEDVAAGQTEGLVKVAAAAGRGLGLHPMGVLQDLYVHLFGTRADEVHGFLDHGKLAQAELGGRPRADGIKGVLDAGFYQLLHFRAFGAAIQRGMIVRGTQAQAETRLVS*