Part of scaffold_242 (Scaffold)

For more information consult the page for scaffold_242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYT17 ENSTTRG00000007508 (Bottlenosed dolphin)

Gene Details

synaptotagmin XVII

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007102, Bottlenosed dolphin)

Protein Percentage 85.48%
cDNA percentage 84.84%
Ka/Ks Ratio 0.26364 (Ka = 0.0344, Ks = 0.1304)

SYT17 ENSBTAG00000014229 (Cow)

Gene Details

synaptotagmin-17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018914, Cow)

Protein Percentage 87.95%
cDNA percentage 86.03%
Ka/Ks Ratio 0.17607 (Ka = 0.0895, Ks = 0.5082)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1560 bp    Location:440519..417447   Strand:-
>bmy_06278
TGCCAGCCTCGGTGCCGACCGGATGGGCTGACCCGCGCACCGCCCCCTCCCACCCCGTTCCCCATCGCGGTCCCCTCCCCCGCTTCTGGCGCGCACGGGCCCCAGCGTCTCCGGCCCCGCCCGCGCCGGGGTCGCTGCAGTCTCCGTGGCTGCCCCGGGCTCCCTCCCCAGGCGCCCCGGCCTTTAGCCAGCCTGGGGAGCGCCTCGGGGGTAGCGCGGGACAGCGAGGGAGGCCGAGGCGGAGGCCCTGGGCGCCCGAGCTCTCCCAACCTGGGAGGTGGCCCCGACTCCGGGAGCCGGAACGCAGGGGAAGGCAAGGACGGGGCGGCCGACGGAGGGGCGGGAGCCGCTCATCAGCCACGCCAGTCACGTCTGGGGCCACCCGGCTGCCTTTTTCTTTCTTTCCCCCTTTGCTTTCTCCCCTCTCTCCGGTTGGCGAGGGCAAAGTGGCCGTGGCGGCGCCATGCCCGGGCCGGAGTGAGTGCGCGCGGGCGAAAATGGCGTACATTCAGAATCTCCGATCTGCTGCTCTGCAGATGGACTTGCCGGCACTGCTGTCAGAAGTGCTATGAATCCAGCTGTTGCCAGTCGAGTGAGGATGAAGTTGAAATTCTGGGACCTTTCCCTGCCCAGACTCCTCCCTGGCTGTTGGCCAGCCGGAGCAGTGACAAGGACGGGGACTCTGTCCACACAGCCAGTGAAGTCCCGCTGACCCCACGGACCAACTCCCCAGATCGGAGATGCTCGTCCTCAGACACATCTAAGTCTACGTACAGCCTGACCCGGAGGATTTCAAGTCTCGATTCCAGACGACCCAGCTCCCCACTCATCGATATTAAACCCATCGAGTTCGGCGTTCTCAGCGCCAAGAAGGAGCCCATCCAGCCCTCGGTGCTCAGACGGACCTATACCCCGGACGACTATTTCAGAAAGTTCGAGCCCCGCCTGTACTCCCTCGGCTCCAACAGCGACGACGTGGACTTYCTGACGGACGCAGAGATCCTGTCCAAGTACCAGCTGGGCATGCTGCACTTCAGCACCCAGTACGACCTGCTGCACAACCACCTGACAGTGCGCGTGATCGAGGCCAGGGACCTGCCACCTCCCATCTCCCACGACGGCGCGCGCCAGGACATGGCGCACTCCAACCCCTACGTCAAGATCTGCCTCCTGCCGGACCAGAAGAACTCCAAGCAGACCGGGGTCAAACGCAAGACCCAGAAGCCCGTGTTCGAGGAGCGCTACACCTTCGAGATCCCCTTCCTGGAGGCGCAGAGGAGGACCCTGCTCCTGACTGTGCTGGACTTTGATAAGTTCTCACGCCACTGTGTCATCGGCAAGGTGGCCGTGCCTTTGTGTGAGGTCGACTTGGTGAAAGGCGGACACTGGTGGAAGGCGCTGATTCCCAGTTCTCAGGAGAGCCTTCAGAGTCTGAGGGGTGAGCTGGTGGCCTTCTTCAGGAGCACCAAACTGATTGGATCTTTGGAAGAGGCCAAAGGACAGTCTGATTTGGTAACCAAGTTGAGTGTCAGCGTGGGGACTGCTGTTTTGATTGAGCAA

Related Sequences

bmy_06278T0 Protein

Length: 520 aa      View alignments
>bmy_06278T0
CQPRCRPDGLTRAPPPPTPFPIAVPSPASGAHGPQRLRPRPRRGRCSLRGCPGLPPQAPRPLASLGSASGVARDSEGGRGGGPGRPSSPNLGGGPDSGSRNAGEGKDGAADGGAGAAHQPRQSRLGPPGCLFLSFPLCFLPSLRLARAKWPWRRHARAGVSARGRKWRTFRISDLLLCRWTCRHCCQKCYESSCCQSSEDEVEILGPFPAQTPPWLLASRSSDKDGDSVHTASEVPLTPRTNSPDRRCSSSDTSKSTYSLTRRISSLDSRRPSSPLIDIKPIEFGVLSAKKEPIQPSVLRRTYTPDDYFRKFEPRLYSLGSNSDDVDFLTDAEILSKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGARQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVLDFDKFSRHCVIGKVAVPLCEVDLVKGGHWWKALIPSSQESLQSLRGELVAFFRSTKLIGSLEEAKGQSDLVTKLSVSVGTAVLIEQ