Part of scaffold_242 (Scaffold)

For more information consult the page for scaffold_242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMC7 ENSBTAG00000016505 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021939, Cow)

Protein Percentage 90.14%
cDNA percentage 90.25%
Ka/Ks Ratio 0.25661 (Ka = 0.0612, Ks = 0.2385)

TMC7  (Minke Whale)

Gene Details

transmembrane channel-like 7

External Links

Gene match (Identifier: BACU012916, Minke Whale)

Protein Percentage 93.8%
cDNA percentage 95.49%
Ka/Ks Ratio 0.58101 (Ka = 0.0397, Ks = 0.0683)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1950 bp    Location:577087..536622   Strand:-
>bmy_06281
ATGGAGAACTTCCCAAGGATGTCTGAAAAGGAAAAAGCGTTCCTCTTCAGTGATGGCCATTTTGAAAAGAGCCTCTCTTTGGACTCCAGTTGCTTTTCTTCTCCATCTGTGAATTTTCTTCAAGAATTGCCAAGCTACCGGTCTATTGCTCGTAAGAGGACGACCATCCTTTCCCGGGACAAGCAAAGTGGCACTTTGCTGAAGCCAACAGACTCTTACAGCTCCCAGTTGGAGGGAGAAATCACTGAAAGCCTTGACAACCAATCCATTCGGAAATATGCACTGAACATCTCTGAGAAGCGGAGACTAAGGGACATTCAGGAGACCCAAATGAAGTACTTATCTGAGTGGGACCAGTGGAAACGGTATAGCAGCAAGTCTTGGGAGAGGTTCATAGAGAAGGCTCGCGAGATGACAACCCACCTGGAGCTGGAAATTCGGCACTGGAATTCGGTCCTACTTCTCCTTCTTACGGTTTCTGGTATTGCTGAATTTGGTGATATTTCTGATCATCTTTATGCTGTCTTGCTCACCAGATACAAGATCACCAACAGCAGCTTTGTGCTCATTCCATCCAAAGGCGCAGATATTCAATGCACAGTGTATCCATTAAGTAGTTCTGGACTCATTTACTTTTACAGTTATATCATAGACTTGCTTTCTGGCACTAACTTCATCTATGATCTGCCTCTGGCTTATGYGTTAAGCACAGTTGCCTACCTGGCCCTGAGCCTTCTTTGGATAGTGAAAAGGTCGGTGGAAGGGTTCAAAAGTAATCTGATCCGGAGCGAGGAGCACTTCCAGAGTTACTGCAACAAGATCTTTGCGGGCTGGGACTTCTGCATCACCAACCGTAGCATGGCGGACCTGAGGCACAGCAGCCTGCGCTACGAGCTCCGAGCAGATCTGGAGGAAGAAAGAATACGGCAGAAAATAGCAGAAAGGACCTCAGAAGAGACGATACGGATTTACTCTTTGAGACTGTTTTTGAACTGTATCGTGCTGGCCGTTTTAGCGGCATGCTTTTATGCAATCTATAGAGCGACTATATTCTCTCAAGAACACATGAAAAAAGAAATTGACAAGATGGTTTTTGGAGAGAACCTCTTGATATTGTGTGTCTTTATGCGGCTGGCCACCATCTGTGTGTTGGTGTTCACTCTGGGCTCCAAGATTACATCCTGCGATAACTACTCGTGTGAGCTCTGCGGCTACAACCAGAAACTCTACCCGTGCTGGGAGACCCAAGTTGGGCAGGAAATGTACAAGCTGATGATCTTTGACCTCATCATCATCTTGGCTGTGACACTCTTTGTGGATTTTCCTAGAAAGATCCTGGTGACCTACTGTTCCTCTTGGAAGCTGTTTCGGTGCTGGGGACAGCAGGAGTTTGCTATCCCTGATAATGTTCTAGGGATCGTTTATGGGCAAACCATTTGCTGGATCGGAGCCTTCTTCTCACCCCTTCTTCCTGCAGTTGCAACGTTGAAGTTCATTATCATCTTTTACATAAGTCTTCTTTACACCTGCAGACCCTCTCCGAGGCAGTTCAGAGCATCTAATTCTAATTTCTTCTTCCTGTTGGTGTTGCTGATTGGGCTGTGCTTGGCAAYAATACCTCTGACAATCAGCATGACACGCATCCCTTCCTCCAAAGCCTGTGGGCCCTTCACCAACTTCAACACCACCTGGGAGGTGGTCCCCAAGATGGTGAGCACCTTCCCCAGCTCGCTGCAGTCTCTGGTCCATGGCATCACGTCGGAAGCCTTCGCAGTGCCTTTCTTCATGATCATCTGTCTCGTTATGTTCTACTTCATCGCCCTAGCAGGAGCGCACAAGCGGGTGGTCGTCCAGCTCCGAGAGCAGCTGTCCCTGGAAAGTCGTGACAAGCGTTACCTAATCCAGAAACTAACAGAAGCCCAGAGGGATATGAGGAACCGGCTAGACTGA

Related Sequences

bmy_06281T0 Protein

Length: 650 aa      View alignments
>bmy_06281T0
MENFPRMSEKEKAFLFSDGHFEKSLSLDSSCFSSPSVNFLQELPSYRSIARKRTTILSRDKQSGTLLKPTDSYSSQLEGEITESLDNQSIRKYALNISEKRRLRDIQETQMKYLSEWDQWKRYSSKSWERFIEKAREMTTHLELEIRHWNSVLLLLLTVSGIAEFGDISDHLYAVLLTRYKITNSSFVLIPSKGADIQCTVYPLSSSGLIYFYSYIIDLLSGTNFIYDLPLAYXLSTVAYLALSLLWIVKRSVEGFKSNLIRSEEHFQSYCNKIFAGWDFCITNRSMADLRHSSLRYELRADLEEERIRQKIAERTSEETIRIYSLRLFLNCIVLAVLAACFYAIYRATIFSQEHMKKEIDKMVFGENLLILCVFMRLATICVLVFTLGSKITSCDNYSCELCGYNQKLYPCWETQVGQEMYKLMIFDLIIILAVTLFVDFPRKILVTYCSSWKLFRCWGQQEFAIPDNVLGIVYGQTICWIGAFFSPLLPAVATLKFIIIFYISLLYTCRPSPRQFRASNSNFFFLLVLLIGLCLAXIPLTISMTRIPSSKACGPFTNFNTTWEVVPKMVSTFPSSLQSLVHGITSEAFAVPFFMIICLVMFYFIALAGAHKRVVVQLREQLSLESRDKRYLIQKLTEAQRDMRNRLD*